RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 UBE3BQ7Z3V4 1068 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 CCAR1Q8IX12 1150 aaKnown RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 SNX27Q96L92 541 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 ASB2Q96Q27 587 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 C1QTNF1Q9BXJ1 281 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 MRS2Q9HD23 443 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 PICK1Q9NRD5 415 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 DAXXQ9UER7 740 aaPredicted RBP6.42□□□□□ -1.38
HTT-202ENST00000502820 SERPINA10Q9UK55 444 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 MAP3K2Q9Y2U5 619 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 ZHX2Q9Y6X8 837 aa6.42□□□□□ -1.38
HTT-202ENST00000502820 ANKRD36CQ5JPF3 1778 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 ANKRD18BA2A2Z9 1011 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 FAM86C2PA6NEL3 165 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 CAPN2P17655 700 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 GYG1P46976 350 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 GNAI1P63096 354 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 MRPS5P82675 430 aaKnown RBP6.41□□□□□ -1.38
HTT-202ENST00000502820 NEXNQ0ZGT2 675 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 IRF5Q13568 498 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 CWF19L2Q2TBE0 894 aaKnown RBP6.41□□□□□ -1.38
HTT-202ENST00000502820 GPAT2Q6NUI2 795 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 CCDC129Q6ZRS4 1044 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 FASTKD5Q7L8L6 764 aaKnown RBP6.41□□□□□ -1.38
HTT-202ENST00000502820 ZSCAN29Q8IWY8 852 aaPredicted RBP6.41□□□□□ -1.38
HTT-202ENST00000502820 BADQ92934 168 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 UIMC1Q96RL1 719 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 GAS2L1Q99501 681 aaPredicted RBP6.41□□□□□ -1.38
HTT-202ENST00000502820 BACH2Q9BYV9 841 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 CNNM1Q9NRU3 951 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 THEGQ9P2T0 379 aa6.41□□□□□ -1.38
HTT-202ENST00000502820 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 CCND3P30281 292 aaPredicted RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 GRIK5Q16478 980 aa6.4□□□□□ -1.38
HTT-202ENST00000502820 CCDC84Q86UT8 332 aaPredicted RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 WWC1Q8IX03 1113 aa6.4□□□□□ -1.38
HTT-202ENST00000502820 C8orf58Q8NAV2 365 aa6.4□□□□□ -1.38
HTT-202ENST00000502820 ATXN2LQ8WWM7 1075 aaKnown RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 TEKT1Q969V4 418 aa6.4□□□□□ -1.38
HTT-202ENST00000502820 RNPC3Q96LT9 517 aaKnown RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 METTL22Q9BUU2 404 aaPredicted RBP6.4□□□□□ -1.38
HTT-202ENST00000502820 OGDHLQ9ULD0 1010 aa6.4□□□□□ -1.38
HTT-202ENST00000502820 IL16Q14005 1332 aa6.4□□□□□ -1.39
HTT-202ENST00000502820 IL1R1P14778 569 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
HTT-202ENST00000502820 PDE4AP27815 886 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 HIBADHP31937 336 aaKnown RBP6.39□□□□□ -1.39
HTT-202ENST00000502820 RTP1P59025 263 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 SMAD3P84022 425 aaKnown RBP6.39□□□□□ -1.39
HTT-202ENST00000502820 IFIT5Q13325 482 aaKnown RBP6.39□□□□□ -1.39
HTT-202ENST00000502820 MOGSQ13724 837 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 TMEM31Q5JXX7 168 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 WDR78Q5VTH9 848 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 POTEEQ6S8J3 1075 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 TSPYL6Q8N831 410 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 TRIB2Q92519 343 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 ZNF594Q96JF6 807 aaPredicted RBP6.39□□□□□ -1.39
HTT-202ENST00000502820 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 PRDM12Q9H4Q4 367 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 EPHX3Q9H6B9 360 aa6.39□□□□□ -1.39
HTT-202ENST00000502820 PI4KAP2A4QPH2 592 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 CXCL11O14625 94 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 PEX10O60683 326 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 FKBP1AP62942 108 aaKnown RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 MAPK8IP2Q13387 824 aaPredicted RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 CCDC30Q5VVM6 783 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 ANO1Q5XXA6 986 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 LDHAL6AQ6ZMR3 332 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 TSR2Q969E8 191 aaKnown RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 NUDT12Q9BQG2 462 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 TSPYL2Q9H2G4 693 aaPredicted RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 SPINK5Q9NQ38 1064 aaPredicted RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 PNMA3Q9UL41 463 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 LRRFIP2Q9Y608 721 aaKnown RBP6.38□□□□□ -1.39
HTT-202ENST00000502820 NDUFB9Q9Y6M9 179 aa6.38□□□□□ -1.39
HTT-202ENST00000502820 A0A0G2JLL6 359 aaPredicted RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 IGKV5-2P06315 115 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 DNAJB2P25686 324 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 MRE11P49959 708 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 RRP1P56182 461 aaKnown RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 IRX6P78412 446 aaPredicted RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 TFF2Q03403 129 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 CACNB2Q08289 660 aaPredicted RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 CCL14Q16627 93 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 CCDC57Q2TAC2 916 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 TREML2Q5T2D2 321 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
HTT-202ENST00000502820 FERMT2Q96AC1 680 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 CHMP4AQ9BY43 222 aa6.37□□□□□ -1.39
HTT-202ENST00000502820 NEURL1BA8MQ27 555 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 APBB1O00213 710 aa6.36□□□□□ -1.39
HTT-202ENST00000502820 SLURP2P0DP57 97 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms