RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CXCL11O14625 94 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 LDHCP07864 332 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 LACTBP83111 547 aaPredicted RBP21.12■□□□□ 0.97
SMC4-226ENST00000497311 PI16Q6UXB8 463 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 FTSJ3Q8IY81 847 aaKnown RBP21.12■□□□□ 0.97
SMC4-226ENST00000497311 DDX4Q9NQI0 724 aaKnown RBP21.12■□□□□ 0.97
SMC4-226ENST00000497311 PICK1Q9NRD5 415 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 PTCH2Q9Y6C5 1203 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 DOCK2Q92608 1830 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 KIAA0100Q14667 2235 aaKnown RBP21.12■□□□□ 0.97
SMC4-226ENST00000497311 CENPFP49454 3210 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 DDTLA6NHG4 134 aaPredicted RBP21.11■□□□□ 0.97
SMC4-226ENST00000497311 UQCRFS1P1P0C7P4 283 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 ATP8B2P98198 1209 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 MAP3K10Q02779 954 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 POLA2Q14181 598 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 PRPF38BQ5VTL8 546 aaKnown RBP21.11■□□□□ 0.97
SMC4-226ENST00000497311 C17orf99Q6UX52 265 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 TBC1D9Q6ZT07 1266 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 NBPF11Q86T75 865 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 SCYL3Q8IZE3 742 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 ZNF384Q8TF68 577 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 NSUN4Q96CB9 384 aaKnown RBP21.11■□□□□ 0.97
SMC4-226ENST00000497311 RAI14Q9P0K7 980 aa21.11■□□□□ 0.97
SMC4-226ENST00000497311 GNRH1P01148 92 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 MCAMP43121 646 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 RHBDL3P58872 404 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
SMC4-226ENST00000497311 MOGSQ13724 837 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 SLC9C1Q4G0N8 1177 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 SSH3Q8TE77 659 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 ARHGAP39Q9C0H5 1083 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 GPR108Q9NPR9 543 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 CPA4Q9UI42 421 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 ZHX2Q9Y6X8 837 aa21.1■□□□□ 0.97
SMC4-226ENST00000497311 MAP4K4O95819 1239 aaPredicted RBP21.09■□□□□ 0.97
SMC4-226ENST00000497311 ZNF333Q96JL9 665 aa21.09■□□□□ 0.97
SMC4-226ENST00000497311 TMEM106CQ9BVX2 250 aa21.09■□□□□ 0.97
SMC4-226ENST00000497311 LRP2BPQ9P2M1 347 aa21.09■□□□□ 0.97
SMC4-226ENST00000497311 CTNND1O60716 968 aaKnown RBP21.08■□□□□ 0.97
SMC4-226ENST00000497311 NPM3O75607 178 aaKnown RBP21.08■□□□□ 0.97
SMC4-226ENST00000497311 SURF6O75683 361 aaKnown RBP21.08■□□□□ 0.97
SMC4-226ENST00000497311 SLC34A2O95436 690 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 PTPRAP18433 802 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 TNNI3KQ59H18 835 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 CCDC158Q5M9N0 1113 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 TTC39AQ5SRH9 613 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 C1orf115Q9H7X2 142 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 FPGT-TNNI3KV9GXZ4 949 aa21.08■□□□□ 0.97
SMC4-226ENST00000497311 PRMT2P55345 433 aa21.07■□□□□ 0.96
SMC4-226ENST00000497311 FASTKD5Q7L8L6 764 aaKnown RBP21.07■□□□□ 0.96
SMC4-226ENST00000497311 PARK7Q99497 189 aaKnown RBP21.07■□□□□ 0.96
SMC4-226ENST00000497311 AFG3L2Q9Y4W6 797 aa21.07■□□□□ 0.96
SMC4-226ENST00000497311 RBBP6Q7Z6E9 1792 aaKnown RBP21.06■□□□□ 0.96
SMC4-226ENST00000497311 A0A0G2JLL6 359 aaPredicted RBP21.06■□□□□ 0.96
SMC4-226ENST00000497311 TBC1D12O60347 775 aa21.06■□□□□ 0.96
SMC4-226ENST00000497311 ECM2O94769 699 aaPredicted RBP21.06■□□□□ 0.96
SMC4-226ENST00000497311 SLURP2P0DP57 97 aa21.06■□□□□ 0.96
SMC4-226ENST00000497311 GPAT2Q6NUI2 795 aa21.06■□□□□ 0.96
SMC4-226ENST00000497311 PRRT2Q7Z6L0 340 aaPredicted RBP21.06■□□□□ 0.96
SMC4-226ENST00000497311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMC4-226ENST00000497311 ZSWIM8A7E2V4 1837 aa21.06■□□□□ 0.96
SMC4-226ENST00000497311 ADGRA2Q96PE1 1338 aa21.05■□□□□ 0.96
SMC4-226ENST00000497311 ZBTB7BO15156 539 aaPredicted RBP21.05■□□□□ 0.96
SMC4-226ENST00000497311 RLBP1P12271 317 aa21.05■□□□□ 0.96
SMC4-226ENST00000497311 EN2P19622 333 aaPredicted RBP21.05■□□□□ 0.96
SMC4-226ENST00000497311 PSMC4P43686 418 aa21.05■□□□□ 0.96
SMC4-226ENST00000497311 DBNDD2Q9BQY9 259 aa21.05■□□□□ 0.96
SMC4-226ENST00000497311 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
SMC4-226ENST00000497311 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
SMC4-226ENST00000497311 FMNL1O95466 1100 aaPredicted RBP21.04■□□□□ 0.96
SMC4-226ENST00000497311 CYP2C8P10632 490 aa21.04■□□□□ 0.96
SMC4-226ENST00000497311 HOXD10P28358 340 aa21.04■□□□□ 0.96
SMC4-226ENST00000497311 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
SMC4-226ENST00000497311 TEX11Q8IYF3 940 aa21.04■□□□□ 0.96
SMC4-226ENST00000497311 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
SMC4-226ENST00000497311 OSBPL5Q9H0X9 879 aaPredicted RBP21.04■□□□□ 0.96
SMC4-226ENST00000497311 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
SMC4-226ENST00000497311 DOCK1Q14185 1865 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 CTGFP29279 349 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 NAA16Q6N069 864 aaPredicted RBP21.03■□□□□ 0.96
SMC4-226ENST00000497311 SH3TC2Q8TF17 1288 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 TRIM47Q96LD4 638 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 SRRDQ9UH36 339 aa21.03■□□□□ 0.96
SMC4-226ENST00000497311 COL2A1P02458 1487 aaPredicted RBP21.02■□□□□ 0.96
SMC4-226ENST00000497311 BRCA2P51587 3418 aa21.02■□□□□ 0.96
SMC4-226ENST00000497311 TRIM75PA6NK02 468 aa21.02■□□□□ 0.96
SMC4-226ENST00000497311 FAM196BA6NMK8 535 aa21.02■□□□□ 0.96
SMC4-226ENST00000497311 BAG3O95817 575 aa21.02■□□□□ 0.96
SMC4-226ENST00000497311 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
SMC4-226ENST00000497311 ZNF512BQ96KM6 892 aaPredicted RBP21.02■□□□□ 0.96
SMC4-226ENST00000497311 SLC45A1Q9Y2W3 748 aa21.02■□□□□ 0.96
SMC4-226ENST00000497311 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
SMC4-226ENST00000497311 MKI67P46013 3256 aaKnown RBP21.02■□□□□ 0.95
SMC4-226ENST00000497311 MYCP01106 439 aaPredicted RBP21.01■□□□□ 0.95
SMC4-226ENST00000497311 CYP2E1P05181 493 aaPredicted RBP21.01■□□□□ 0.95
SMC4-226ENST00000497311 BCRP11274 1271 aa21.01■□□□□ 0.95
SMC4-226ENST00000497311 PLCG2P16885 1265 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms