RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
RNF220-217ENST00000496262 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
RNF220-217ENST00000496262 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
RNF220-217ENST00000496262 ZNF112Q9UJU3 913 aa13.45□□□□□ -0.26
RNF220-217ENST00000496262 GAKO14976 1311 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 PNMA6EA0A0J9YXQ4 647 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 ENTPD3O75355 529 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 MECOMQ03112 1051 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 MTX1Q13505 466 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 SLC4A8Q2Y0W8 1093 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 NOL9Q5SY16 702 aaKnown RBP13.44□□□□□ -0.26
RNF220-217ENST00000496262 TBC1D9Q6ZT07 1266 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 SLF2Q8IX21 1173 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 ZNF333Q96JL9 665 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
RNF220-217ENST00000496262 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 ZHX2Q9Y6X8 837 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
RNF220-217ENST00000496262 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 BRCA2P51587 3418 aa13.44□□□□□ -0.26
RNF220-217ENST00000496262 MROH7-TTC4A0A0A0MT08 1334 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
RNF220-217ENST00000496262 CYP2C8P10632 490 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 G3BP1Q13283 466 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNF220-217ENST00000496262 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 TMEM57Q8N5G2 664 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 SPATA5Q8NB90 893 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 IDI2Q9BXS1 227 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 RAI14Q9P0K7 980 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 HMG20BQ9P0W2 317 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
RNF220-217ENST00000496262 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 ATRNL1Q5VV63 1379 aa13.43□□□□□ -0.26
RNF220-217ENST00000496262 PDS5AQ29RF7 1337 aaKnown RBP13.42□□□□□ -0.26
RNF220-217ENST00000496262 DOCK2Q92608 1830 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
RNF220-217ENST00000496262 CTGFP29279 349 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 PSMC4P43686 418 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 OS9Q13438 667 aaPredicted RBP13.42□□□□□ -0.26
RNF220-217ENST00000496262 MOGSQ13724 837 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 C17orf99Q6UX52 265 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 GADL1Q6ZQY3 521 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
RNF220-217ENST00000496262 PARK7Q99497 189 aaKnown RBP13.42□□□□□ -0.26
RNF220-217ENST00000496262 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 MYH2Q9UKX2 1941 aa13.42□□□□□ -0.26
RNF220-217ENST00000496262 TRIM75PA6NK02 468 aa13.41□□□□□ -0.26
RNF220-217ENST00000496262 PTPRAP18433 802 aa13.41□□□□□ -0.26
RNF220-217ENST00000496262 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
RNF220-217ENST00000496262 ZNF384Q8TF68 577 aa13.41□□□□□ -0.26
RNF220-217ENST00000496262 TRIM47Q96LD4 638 aa13.41□□□□□ -0.26
RNF220-217ENST00000496262 ADGRA2Q96PE1 1338 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 OSBPP22059 807 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 MCAMP43121 646 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 GSTO1P78417 241 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 NSUN4Q96CB9 384 aaKnown RBP13.4□□□□□ -0.26
RNF220-217ENST00000496262 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
RNF220-217ENST00000496262 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 LRP2BPQ9P2M1 347 aa13.4□□□□□ -0.26
RNF220-217ENST00000496262 A0A0G2JLL6 359 aaPredicted RBP13.39□□□□□ -0.27
RNF220-217ENST00000496262 CXCL11O14625 94 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 GNRH1P01148 92 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
RNF220-217ENST00000496262 RHBDL3P58872 404 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 PRRT2Q7Z6L0 340 aaPredicted RBP13.39□□□□□ -0.27
RNF220-217ENST00000496262 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
RNF220-217ENST00000496262 RAET1EQ8TD07 263 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.274e-6■■■□□ 17.2
RNF220-217ENST00000496262 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
RNF220-217ENST00000496262 MYPNQ86TC9 1320 aa13.39□□□□□ -0.27
RNF220-217ENST00000496262 ZBTB22O15209 634 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
RNF220-217ENST00000496262 LDHCP07864 332 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 MTFR1Q15390 333 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 FASTKD5Q7L8L6 764 aaKnown RBP13.38□□□□□ -0.27
RNF220-217ENST00000496262 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
RNF220-217ENST00000496262 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
RNF220-217ENST00000496262 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
RNF220-217ENST00000496262 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
RNF220-217ENST00000496262 SURF6O75683 361 aaKnown RBP13.37□□□□□ -0.27
RNF220-217ENST00000496262 UQCRFS1P1P0C7P4 283 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 BCRP11274 1271 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 HOXD10P28358 340 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 PRMT2P55345 433 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 FCGRTP55899 365 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 PRKCZQ05513 592 aa13.37□□□□□ -0.27
RNF220-217ENST00000496262 TNNI3KQ59H18 835 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms