RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 UQCRFS1P1P0C7P4 283 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 ARID4AP29374 1257 aaPredicted RBP22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 LACTBP83111 547 aaPredicted RBP22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 OS9Q13438 667 aaPredicted RBP22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 SLC9C1Q4G0N8 1177 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 PRPF38BQ5VTL8 546 aaKnown RBP22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 TBC1D9Q6ZT07 1266 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 SH3BP5LQ7L8J4 393 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 SCYL3Q8IZE3 742 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 RAI14Q9P0K7 980 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 PTCH2Q9Y6C5 1203 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 DDTLA6NHG4 134 aaPredicted RBP22.67■■□□□ 1.22
CLCNKA-207ENST00000495784 PHF20L1A8MW92 1017 aa22.67■■□□□ 1.22
CLCNKA-207ENST00000495784 NBPF11Q86T75 865 aa22.67■■□□□ 1.22
CLCNKA-207ENST00000495784 DDX4Q9NQI0 724 aaKnown RBP22.67■■□□□ 1.22
CLCNKA-207ENST00000495784 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 CXCL11O14625 94 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 ZNF384Q8TF68 577 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 ARHGAP39Q9C0H5 1083 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 CPA4Q9UI42 421 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 ZHX2Q9Y6X8 837 aa22.66■■□□□ 1.22
CLCNKA-207ENST00000495784 GNRH1P01148 92 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 MCAMP43121 646 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 RHBDL3P58872 404 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 POLA2Q14181 598 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 C17orf99Q6UX52 265 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 ITPRIPQ8IWB1 547 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 NSUN4Q96CB9 384 aaKnown RBP22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 ZNF333Q96JL9 665 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 C1orf115Q9H7X2 142 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 LRP2BPQ9P2M1 347 aa22.65■■□□□ 1.22
CLCNKA-207ENST00000495784 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 ECM2O94769 699 aaPredicted RBP22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 SLC34A2O95436 690 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 MAP4K4O95819 1239 aaPredicted RBP22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 PTPRAP18433 802 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 ATP8B2P98198 1209 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 MAP3K10Q02779 954 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 MOGSQ13724 837 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 TNNI3KQ59H18 835 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 TTC39AQ5SRH9 613 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 SSH3Q8TE77 659 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 PARK7Q99497 189 aaKnown RBP22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 GPR108Q9NPR9 543 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 FPGT-TNNI3KV9GXZ4 949 aa22.64■■□□□ 1.21
CLCNKA-207ENST00000495784 CTNND1O60716 968 aaKnown RBP22.63■■□□□ 1.21
CLCNKA-207ENST00000495784 NPM3O75607 178 aaKnown RBP22.63■■□□□ 1.21
CLCNKA-207ENST00000495784 CCDC158Q5M9N0 1113 aa22.63■■□□□ 1.21
CLCNKA-207ENST00000495784 FASTKD5Q7L8L6 764 aaKnown RBP22.63■■□□□ 1.21
CLCNKA-207ENST00000495784 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
CLCNKA-207ENST00000495784 SLURP2P0DP57 97 aa22.62■■□□□ 1.21
CLCNKA-207ENST00000495784 PRMT2P55345 433 aa22.62■■□□□ 1.21
CLCNKA-207ENST00000495784 SNRKQ9NRH2 765 aa22.62■■□□□ 1.21
CLCNKA-207ENST00000495784 ADGRA2Q96PE1 1338 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 A0A0G2JLL6 359 aaPredicted RBP22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 EN2P19622 333 aaPredicted RBP22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 PSMC4P43686 418 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 CENPFP49454 3210 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 GPAT2Q6NUI2 795 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 PRRT2Q7Z6L0 340 aaPredicted RBP22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 DBNDD2Q9BQY9 259 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 AFG3L2Q9Y4W6 797 aa22.61■■□□□ 1.21
CLCNKA-207ENST00000495784 TBC1D12O60347 775 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 FMNL1O95466 1100 aaPredicted RBP22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 MYCP01106 439 aaPredicted RBP22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 CYP2C8P10632 490 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 RLBP1P12271 317 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 HOXD10P28358 340 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 NAA16Q6N069 864 aaPredicted RBP22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 GADL1Q6ZQY3 521 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 TEX11Q8IYF3 940 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 SH3TC2Q8TF17 1288 aa22.6■■□□□ 1.21
CLCNKA-207ENST00000495784 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 TRIM75PA6NK02 468 aa22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 ZBTB7BO15156 539 aaPredicted RBP22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 TRIM47Q96LD4 638 aa22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 OSBPL5Q9H0X9 879 aaPredicted RBP22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 ZSWIM8A7E2V4 1837 aa22.59■■□□□ 1.21
CLCNKA-207ENST00000495784 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.21
CLCNKA-207ENST00000495784 FAM196BA6NMK8 535 aa22.58■■□□□ 1.21
CLCNKA-207ENST00000495784 BAG3O95817 575 aa22.58■■□□□ 1.21
CLCNKA-207ENST00000495784 SRRDQ9UH36 339 aa22.58■■□□□ 1.21
CLCNKA-207ENST00000495784 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.21
CLCNKA-207ENST00000495784 PLCG2P16885 1265 aa22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 CTGFP29279 349 aa22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 SH3RF3Q8TEJ3 882 aaPredicted RBP22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 COL2A1P02458 1487 aaPredicted RBP22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 ZBED9Q6R2W3 1325 aa22.57■■□□□ 1.2
CLCNKA-207ENST00000495784 DOCK1Q14185 1865 aa22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 BCRP11274 1271 aa22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 OSBPP22059 807 aa22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 FCGRTP55899 365 aa22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 CCDC84Q86UT8 332 aaPredicted RBP22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 RAET1EQ8TD07 263 aa22.56■■□□□ 1.2
CLCNKA-207ENST00000495784 ZNF512BQ96KM6 892 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms