RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 KCNH4Q9UQ05 1017 aa15.69■□□□□ 0.1
SKA1-205ENST00000494518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.69■□□□□ 0.1
SKA1-205ENST00000494518 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 SEMA3EO15041 775 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 SRGAP3O43295 1099 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 PSMC4P43686 418 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 MOGSQ13724 837 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 NOL9Q5SY16 702 aaKnown RBP15.68■□□□□ 0.1
SKA1-205ENST00000494518 SH3BP5LQ7L8J4 393 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 ZSCAN29Q8IWY8 852 aaPredicted RBP15.68■□□□□ 0.1
SKA1-205ENST00000494518 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.68■□□□□ 0.1
SKA1-205ENST00000494518 ADGRA2Q96PE1 1338 aa15.68■□□□□ 0.1
SKA1-205ENST00000494518 MYO5AQ9Y4I1 1855 aaKnown RBP15.67■□□□□ 0.1
SKA1-205ENST00000494518 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
SKA1-205ENST00000494518 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
SKA1-205ENST00000494518 CYP2C8P10632 490 aa15.67■□□□□ 0.1
SKA1-205ENST00000494518 BTDP43251 543 aa15.67■□□□□ 0.1
SKA1-205ENST00000494518 CCDC84Q86UT8 332 aaPredicted RBP15.67■□□□□ 0.1
SKA1-205ENST00000494518 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
SKA1-205ENST00000494518 DDX4Q9NQI0 724 aaKnown RBP15.67■□□□□ 0.1
SKA1-205ENST00000494518 GAKO14976 1311 aa15.67■□□□□ 0.1
SKA1-205ENST00000494518 DDTLA6NHG4 134 aaPredicted RBP15.66■□□□□ 0.1
SKA1-205ENST00000494518 PHF20L1A8MW92 1017 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 FMNL1O95466 1100 aaPredicted RBP15.66■□□□□ 0.1
SKA1-205ENST00000494518 OSBPP22059 807 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 MTFR1Q15390 333 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 GPAT2Q6NUI2 795 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 PI16Q6UXB8 463 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 GADL1Q6ZQY3 521 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 ZGPATQ8N5A5 531 aaKnown RBP15.66■□□□□ 0.1
SKA1-205ENST00000494518 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 PICK1Q9NRD5 415 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 ZHX2Q9Y6X8 837 aa15.66■□□□□ 0.1
SKA1-205ENST00000494518 FAM196BA6NMK8 535 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 ENTPD3O75355 529 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 HABP4Q5JVS0 413 aaKnown RBP15.65■□□□□ 0.1
SKA1-205ENST00000494518 SCYL3Q8IZE3 742 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 IDI2Q9BXS1 227 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 SRRDQ9UH36 339 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 MYPNQ86TC9 1320 aa15.65■□□□□ 0.1
SKA1-205ENST00000494518 GNAI3P08754 354 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 MECOMQ03112 1051 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 TBC1D9Q6ZT07 1266 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 RAET1EQ8TD07 263 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 ZNF384Q8TF68 577 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
SKA1-205ENST00000494518 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 CDK5RAP2Q96SN8 1893 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 PARK7Q99497 189 aaKnown RBP15.64■□□□□ 0.09
SKA1-205ENST00000494518 PCDH10Q9P2E7 1040 aa15.64■□□□□ 0.09
SKA1-205ENST00000494518 TRIM75PA6NK02 468 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 CXCL11O14625 94 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 GNRH1P01148 92 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 PTPRAP18433 802 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 PRKCZQ05513 592 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
SKA1-205ENST00000494518 GORABQ5T7V8 394 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 SPTY2D1Q68D10 685 aaPredicted RBP15.63■□□□□ 0.09
SKA1-205ENST00000494518 HMG20BQ9P0W2 317 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 AKAP2Q9Y2D5 859 aa15.63■□□□□ 0.09
SKA1-205ENST00000494518 A0A0G2JLL6 359 aaPredicted RBP15.62■□□□□ 0.09
SKA1-205ENST00000494518 BCAR3O75815 825 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 BCRP11274 1271 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 TRIM27P14373 513 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 GRK4P32298 578 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 PRMT2P55345 433 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 RHBDL3P58872 404 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 PRRT2Q7Z6L0 340 aaPredicted RBP15.62■□□□□ 0.09
SKA1-205ENST00000494518 SLF2Q8IX21 1173 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 BIN2Q9UBW5 565 aaPredicted RBP15.62■□□□□ 0.09
SKA1-205ENST00000494518 GABRQQ9UN88 632 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 AFG3L2Q9Y4W6 797 aa15.62■□□□□ 0.09
SKA1-205ENST00000494518 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
SKA1-205ENST00000494518 SIPA1L1O43166 1804 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 HOXD10P28358 340 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 MTX1Q13505 466 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 SPATA5Q8NB90 893 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 RAI14Q9P0K7 980 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 MAST2Q6P0Q8 1798 aa15.61■□□□□ 0.09
SKA1-205ENST00000494518 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
SKA1-205ENST00000494518 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
SKA1-205ENST00000494518 GNAI2P04899 355 aa15.6■□□□□ 0.09
SKA1-205ENST00000494518 CCL5P13501 91 aa15.6■□□□□ 0.09
SKA1-205ENST00000494518 FCGRTP55899 365 aa15.6■□□□□ 0.09
SKA1-205ENST00000494518 FASTKD5Q7L8L6 764 aaKnown RBP15.6■□□□□ 0.09
SKA1-205ENST00000494518 FAM163AQ96GL9 167 aaPredicted RBP15.6■□□□□ 0.09
SKA1-205ENST00000494518 H0YGN5 161 aa15.59■□□□□ 0.09
SKA1-205ENST00000494518 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
SKA1-205ENST00000494518 MCAMP43121 646 aa15.59■□□□□ 0.09
SKA1-205ENST00000494518 G3BP1Q13283 466 aaKnown RBP eCLIP15.59■□□□□ 0.09
SKA1-205ENST00000494518 ATF7IPQ6VMQ6 1270 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms