RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NSUN5Q96P11 429 aaKnown RBP6.14□□□□□ -1.43
GTF3A-208ENST00000493903 HHIPQ96QV1 700 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 RBSNQ9H1K0 784 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 SUGT1Q9Y2Z0 365 aa6.14□□□□□ -1.43
GTF3A-208ENST00000493903 PDGFRBP09619 1106 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 SEPT6Q14141 434 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 LONRF2Q1L5Z9 754 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 ZC3H12BQ5HYM0 836 aaKnown RBP6.13□□□□□ -1.43
GTF3A-208ENST00000493903 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 TM9SF2Q99805 663 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 MUC3BQ9H195 1237 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 RASSF4Q9H2L5 321 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 ZMYM5Q9UJ78 669 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 PCDHB14Q9Y5E9 798 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 SLC12A7Q9Y666 1083 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 KDM2BQ8NHM5 1336 aa6.13□□□□□ -1.43
GTF3A-208ENST00000493903 MEIS3P2A8K0S8 358 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 EIF5BO60841 1220 aaKnown RBP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 SMNDC1O75940 238 aaKnown RBP eCLIP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 DDAH1O94760 285 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 GHRHP01286 108 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 SNRPNP63162 240 aaKnown RBP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 PCDH1Q08174 1060 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 TBC1D8BQ0IIM8 1120 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 PPP2R5EQ16537 467 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 TKFCQ3LXA3 575 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 KANK3Q6NY19 840 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 TAB3Q8N5C8 712 aaPredicted RBP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 ZSWIM2Q8NEG5 633 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 DDX54Q8TDD1 881 aaKnown RBP6.12□□□□□ -1.43
GTF3A-208ENST00000493903 GAL3ST3Q96A11 431 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 BTBD6Q96KE9 485 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 MDFIQ99750 246 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 PCGF6Q9BYE7 350 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 IGFLR1Q9H665 355 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 RRAGCQ9HB90 399 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 FAN1Q9Y2M0 1017 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 PTCH2Q9Y6C5 1203 aa6.12□□□□□ -1.43
GTF3A-208ENST00000493903 CNTNAP5Q8WYK1 1306 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 PRR36Q9H6K5 1346 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 ELOA3CA0A087WX78 387 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 A0A1W2PQH9 124 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 ELOA3DA6NLF2 546 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 HCLS1P14317 486 aaPredicted RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 ELOA3BQ3SY89 546 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 DALRD3Q5D0E6 543 aaKnown RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 CHSY3Q70JA7 882 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 CERS3Q8IU89 383 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 FAM178BQ8IXR5 827 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 ELOA3Q8NG57 546 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
GTF3A-208ENST00000493903 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 UBE2OQ9C0C9 1292 aaKnown RBP6.11□□□□□ -1.43
GTF3A-208ENST00000493903 CCDC163A0A0D9SF12 145 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 PLEKHD1A6NEE1 506 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 DIAPH1O60610 1272 aaKnown RBP6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ASMTLO95671 621 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 HOXB4P17483 251 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-208ENST00000493903 GUCY2CP25092 1073 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ADH7P40394 386 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ZNF157P51786 506 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-208ENST00000493903 ATP11AP98196 1134 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 NCAPHQ15003 741 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 TMEM67Q5HYA8 995 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 EEPD1Q7L9B9 569 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 TTC6Q86TZ1 520 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 SLC26A8Q96RN1 970 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 CEP89Q96ST8 783 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 EPN3Q9H201 632 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 SOX13Q9UN79 622 aa6.1□□□□□ -1.43
GTF3A-208ENST00000493903 POLR3KQ9Y2Y1 108 aaPredicted RBP6.1□□□□□ -1.43
GTF3A-208ENST00000493903 J3QW42 95 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 PTPRAP18433 802 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 ALAS2P22557 587 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 DGKGP49619 791 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 AP3B2Q13367 1082 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 MLECQ14165 292 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 ZNF423Q2M1K9 1284 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 HGSNATQ68CP4 663 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 INTS3Q68E01 1043 aaKnown RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 C6orf15Q6UXA7 325 aaPredicted RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 SPATC1Q76KD6 591 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 VN1R5Q7Z5H4 357 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 FERMT3Q86UX7 667 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 PRPF38AQ8NAV1 312 aaKnown RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 SCARF2Q96GP6 870 aaPredicted RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 ADAM19Q9H013 955 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 CBX8Q9HC52 389 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 HOMER2Q9NSB8 354 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 CACNA2D2Q9NY47 1150 aa6.09□□□□□ -1.43
GTF3A-208ENST00000493903 MAGEC2Q9UBF1 373 aaPredicted RBP6.09□□□□□ -1.43
GTF3A-208ENST00000493903 PFDN2Q9UHV9 154 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms