RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 VPS16Q9H269 839 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 DPP8Q6V1X1 898 aaPredicted RBP15.29■□□□□ 0.04
TRIM11-204ENST00000493030 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 ANGEL1Q9UNK9 670 aaKnown RBP15.29■□□□□ 0.04
TRIM11-204ENST00000493030 FAM169AQ9Y6X4 670 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 NOD1Q9Y239 953 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 SMTNP53814 917 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 TBC1D8BQ0IIM8 1120 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
TRIM11-204ENST00000493030 OTUD7BQ6GQQ9 843 aa15.29■□□□□ 0.04
TRIM11-204ENST00000493030 DDX39AO00148 427 aaKnown RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 KRT9P35527 623 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 ZHX1Q9UKY1 873 aaPredicted RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 AKR1B15C9JRZ8 316 aaPredicted RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 TCP10Q12799 353 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 LARGE2Q8N3Y3 721 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 MTRF1LQ9UGC7 380 aaKnown RBP15.28■□□□□ 0.04
TRIM11-204ENST00000493030 KCNH3Q9ULD8 1083 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 STX10O60499 249 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 VAV2P52735 878 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 NCAPH2Q6IBW4 605 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 KCNK9Q9NPC2 374 aa15.28■□□□□ 0.04
TRIM11-204ENST00000493030 TUBB4AP04350 444 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 PSMC4P43686 418 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 ATL3Q6DD88 541 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 DIS3L2Q8IYB7 885 aaKnown RBP15.27■□□□□ 0.04
TRIM11-204ENST00000493030 CPXCR1Q8N123 301 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 TTC14Q96N46 770 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 SEL1L2Q5TEA6 688 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 FAM173BQ6P4H8 233 aa15.27■□□□□ 0.04
TRIM11-204ENST00000493030 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.04
TRIM11-204ENST00000493030 ATP2A2P16615 1042 aaKnown RBP15.27■□□□□ 0.03
TRIM11-204ENST00000493030 TNNC1P63316 161 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 WDR66Q8TBY9 1149 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 TBX22Q9Y458 520 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 PIK3C2GO75747 1445 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 ZEB2O60315 1214 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 IL13P35225 146 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 SLC1A4P43007 532 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 USH1GQ495M9 461 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 SMC6Q96SB8 1091 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 USP19O94966 1318 aa15.27■□□□□ 0.03
TRIM11-204ENST00000493030 NOP56O00567 594 aaKnown RBP15.26■□□□□ 0.03
TRIM11-204ENST00000493030 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
TRIM11-204ENST00000493030 SPOPO43791 374 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 CNNM4Q6P4Q7 775 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 DTNBO60941 627 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 MNAT1P51948 309 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 ANKS4BQ8N8V4 417 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 IGSF22Q8N9C0 903 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 AGTPBP1Q9UPW5 1226 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 H0YIN7 160 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 TNFAIP3P21580 790 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 RASA3Q14644 834 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
TRIM11-204ENST00000493030 LPIN2Q92539 896 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 CCDC117Q8IWD4 279 aaPredicted RBP15.26■□□□□ 0.03
TRIM11-204ENST00000493030 SBNO1A3KN83 1393 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 MAST3O60307 1309 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 MAPKAPK5Q8IW41 473 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
TRIM11-204ENST00000493030 PHKBQ93100 1093 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 TSGA10Q9BZW7 698 aa15.26■□□□□ 0.03
TRIM11-204ENST00000493030 ERCC3P19447 782 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 STRN3Q13033 797 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 TTC38Q5R3I4 469 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 KIAA1524Q8TCG1 905 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
TRIM11-204ENST00000493030 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 CAPN2P17655 700 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 INF2Q27J81 1249 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 CSGALNACT2Q8N6G5 542 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 GPHNQ9NQX3 736 aaPredicted RBP15.25■□□□□ 0.03
TRIM11-204ENST00000493030 VPS18Q9P253 973 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 MAPKBP1O60336 1514 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 TRPC3Q13507 836 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
TRIM11-204ENST00000493030 RNF34Q969K3 372 aa15.25■□□□□ 0.03
TRIM11-204ENST00000493030 RNASE9P60153 205 aaKnown RBP15.25■□□□□ 0.03
TRIM11-204ENST00000493030 UAP1Q16222 522 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms