RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 GOLIM4O00461 696 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 IDH1O75874 414 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 MAP4K4O95819 1239 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 IGHDP01880 384 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 CHGBP05060 677 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 CYP7A1P22680 504 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 TM4SF4P48230 202 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 PICALMQ13492 652 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 HDAC1Q13547 482 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 VGLL4Q14135 290 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 SLFNL1Q499Z3 407 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 TSHZ3Q63HK5 1081 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 MAGEB6Q8N7X4 407 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 OTUD7AQ8TE49 926 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 ZKSCAN4Q969J2 545 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 WNK4Q96J92 1243 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 DNAJC2Q99543 621 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 HAUS7Q99871 368 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 RNF186Q9NXI6 227 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 MYH13Q9UKX3 1938 aa8.76□□□□□ -1.01
PDLIM1-204ENST00000492511 INPP5BP32019 993 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 AAMPQ13685 434 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 TEX11Q8IYF3 940 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 MIGA1Q8NAN2 632 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 MS4A4AQ96JQ5 239 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 RIOK1Q9BRS2 568 aaKnown RBP8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 ZNF341Q9BYN7 854 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 OSBPL5Q9H0X9 879 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 ECHDC1Q9NTX5 307 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 PAG1Q9NWQ8 432 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 SNCAIPQ9Y6H5 919 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
PDLIM1-204ENST00000492511 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 TRPA1O75762 1119 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 BAG3O95817 575 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 ZBTB48P10074 688 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 PDE6AP16499 860 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 IRX6P78412 446 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 MAP3K12Q12852 859 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 RRP1BQ14684 758 aaKnown RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 SLC9C2Q5TAH2 1124 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 DCAF15Q66K64 600 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 TGFBRAP1Q8WUH2 860 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 PTPN18Q99952 460 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 R3HDMLQ9H3Y0 253 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 ZNF532Q9HCE3 1301 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 MYH2Q9UKX2 1941 aa8.74□□□□□ -1.01
PDLIM1-204ENST00000492511 CASP8AP2Q9UKL3 1982 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 TBC1D12O60347 775 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 ADD2P35612 726 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 RGS19P49795 217 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 ANKRD45Q5TZF3 282 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 TMED8Q6PL24 325 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 METTL16Q86W50 562 aaKnown RBP8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 MAPKAPK5Q8IW41 473 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 ZSCAN29Q8IWY8 852 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 SMC5Q8IY18 1101 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 GCC1Q96CN9 775 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 FLT1P17948 1338 aa8.73□□□□□ -1.01
PDLIM1-204ENST00000492511 COL2A1P02458 1487 aaPredicted RBP8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 MANSC4A6NHS7 340 aaPredicted RBP8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 FAM196BA6NMK8 535 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 IGF2BP3O00425 579 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 IRF6O14896 467 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 PLCG2P16885 1265 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 JAG1P78504 1218 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 NOL9Q5SY16 702 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 ERO1BQ86YB8 467 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 IFNL1Q8IU54 200 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 BRI3BPQ8WY22 251 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 NOL10Q9BSC4 688 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 DNAJC18Q9H819 358 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 PALD1Q9ULE6 856 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 CSADQ9Y600 493 aa8.72□□□□□ -1.01
PDLIM1-204ENST00000492511 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.01
PDLIM1-204ENST00000492511 MYO5AQ9Y4I1 1855 aaKnown RBP8.71□□□□□ -1.01
PDLIM1-204ENST00000492511 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 TBC1D8O95759 1140 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 INHBEP58166 350 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 EVX2Q03828 476 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 PPATQ06203 517 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 SREBF2Q12772 1141 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 PPIL2Q13356 520 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 MOGSQ13724 837 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 UBE3CQ15386 1083 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 LCORLQ8N3X6 602 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 OTUD5Q96G74 571 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms