RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MCAMP43121 646 aa23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 BTDP43251 543 aa23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 TBC1D9Q6ZT07 1266 aa23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SPATA5Q8NB90 893 aa23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ZCCHC17Q9NP64 241 aaKnown RBP23.97■■□□□ 1.43
TNFRSF1B-202ENST00000489921 DDTLA6NHG4 134 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 TLR2O60603 784 aa23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 ERICH6Q7L0X2 663 aa23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 NSUN4Q96CB9 384 aaKnown RBP23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 C1orf115Q9H7X2 142 aa23.96■■□□□ 1.43
TNFRSF1B-202ENST00000489921 SLF2Q8IX21 1173 aa23.95■■□□□ 1.42
TNFRSF1B-202ENST00000489921 PHIPQ8WWQ0 1821 aa23.95■■□□□ 1.42
TNFRSF1B-202ENST00000489921 MYO5AQ9Y4I1 1855 aaKnown RBP23.94■■□□□ 1.42
TNFRSF1B-202ENST00000489921 GPR108Q9NPR9 543 aa23.94■■□□□ 1.42
TNFRSF1B-202ENST00000489921 RBBP6Q7Z6E9 1792 aaKnown RBP23.93■■□□□ 1.42
TNFRSF1B-202ENST00000489921 GORABQ5T7V8 394 aa23.93■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ARHGAP39Q9C0H5 1083 aa23.93■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ZBED9Q6R2W3 1325 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 TNNI3KQ59H18 835 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 C17orf99Q6UX52 265 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ANKRD23Q86SG2 305 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ARMC5Q96C12 935 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 FPGT-TNNI3KV9GXZ4 949 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 PTPRFP10586 1907 aa23.92■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ADGRA2Q96PE1 1338 aa23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 NPM3O75607 178 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 PICALMQ13492 652 aa23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 GPAT2Q6NUI2 795 aa23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 DBNDD2Q9BQY9 259 aa23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 DOCK1Q14185 1865 aa23.91■■□□□ 1.42
TNFRSF1B-202ENST00000489921 POTEFA5A3E0 1075 aa23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 SURF6O75683 361 aaKnown RBP23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 UQCRFS1P1P0C7P4 283 aa23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 PTPRAP18433 802 aa23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 LACTBP83111 547 aaPredicted RBP23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 ITPRIPQ8IWB1 547 aa23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 FTSJ3Q8IY81 847 aaKnown RBP23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 SCYL3Q8IZE3 742 aa23.9■■□□□ 1.42
TNFRSF1B-202ENST00000489921 PDHXO00330 501 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CXCL11O14625 94 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CTGFP29279 349 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ZSCAN29Q8IWY8 852 aaPredicted RBP23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 SNRKQ9NRH2 765 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 RAI14Q9P0K7 980 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 PTCH2Q9Y6C5 1203 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CDK5RAP2Q96SN8 1893 aa23.89■■□□□ 1.41
TNFRSF1B-202ENST00000489921 LDHCP07864 332 aa23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 GSTO1P78417 241 aa23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 AFG3L2Q9Y4W6 797 aa23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ZHX2Q9Y6X8 837 aa23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 KIAA0100Q14667 2235 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 MAST2Q6P0Q8 1798 aa23.88■■□□□ 1.41
TNFRSF1B-202ENST00000489921 TBC1D12O60347 775 aa23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 MAP4K4O95819 1239 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CYP2E1P05181 493 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CPA4Q9UI42 421 aa23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 COL2A1P02458 1487 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 SIPA1L1O43166 1804 aa23.87■■□□□ 1.41
TNFRSF1B-202ENST00000489921 A0A0G2JLL6 359 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CEP85Q6P2H3 762 aa23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 PRRT2Q7Z6L0 340 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 PANK1Q8TE04 598 aa23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ZNF333Q96JL9 665 aa23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ZNF512BQ96KM6 892 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 TLR7Q9NYK1 1049 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 LRP2BPQ9P2M1 347 aa23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 DBNLQ9UJU6 430 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1B-202ENST00000489921 FOCADQ5VW36 1801 aa23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ARHGEF6Q15052 776 aa23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 TTC39AQ5SRH9 613 aa23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ADGRA1Q86SQ6 560 aa23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 SH3RF3Q8TEJ3 882 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 EAF2Q96CJ1 260 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 OSBPL5Q9H0X9 879 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ATAD5Q96QE3 1844 aa23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 FAM196BA6NMK8 535 aa23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 OS9Q13438 667 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 RRP1BQ14684 758 aaKnown RBP23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CCDC158Q5M9N0 1113 aa23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CCDC84Q86UT8 332 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 PICK1Q9NRD5 415 aa23.84■■□□□ 1.41
TNFRSF1B-202ENST00000489921 ZAP70P43403 619 aa23.83■■□□□ 1.41
TNFRSF1B-202ENST00000489921 CCDC8Q9H0W5 538 aaPredicted RBP23.83■■□□□ 1.41
TNFRSF1B-202ENST00000489921 MGAMO43451 1857 aa23.83■■□□□ 1.4
TNFRSF1B-202ENST00000489921 CYP2C8P10632 490 aa23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 BCRP11274 1271 aa23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PPP4CP60510 307 aa23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 TEX11Q8IYF3 940 aa23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 TRIM47Q96LD4 638 aa23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 PIH1D3Q9NQM4 214 aaKnown RBP23.82■■□□□ 1.4
TNFRSF1B-202ENST00000489921 GNRH1P01148 92 aa23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 EN2P19622 333 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 KIF22Q14807 665 aa23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 SLC9C1Q4G0N8 1177 aa23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 NAA16Q6N069 864 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF1B-202ENST00000489921 FASTKD5Q7L8L6 764 aaKnown RBP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms