RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TUBB8Q3ZCM7 444 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 CRTC2Q53ET0 693 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 TTC19Q6DKK2 380 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 TMC6Q7Z403 805 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 SRGAP1Q7Z6B7 1085 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 CEP112Q8N8E3 955 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 CCDC26Q8TAB7 109 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 FAM174AQ8TBP5 190 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 ZNF483Q8TF39 744 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 FAM204AQ9H8W3 233 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 SPATS2LQ9NUQ6 558 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 HYPKQ9NX55 129 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 WBP1LQ9NX94 342 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 STAP2Q9UGK3 403 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 NOVA2Q9UNW9 492 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 SNX14Q9Y5W7 946 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 DUOX2Q9NRD8 1548 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 SBNO2Q9Y2G9 1366 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 ABCA9Q8IUA7 1624 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 ANKRD18BA2A2Z9 1011 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 FANCGO15287 622 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 SF3B2Q13435 895 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CASP8Q14790 479 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 B4GALNT4Q76KP1 1039 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 IQCA1Q86XH1 822 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CCDC50Q8IVM0 306 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 MAGEC3Q8TD91 643 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 BPIFA3Q9BQP9 254 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ABCB6Q9NP58 842 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CPSF2Q9P2I0 782 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 PTPRTO14522 1441 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ADGRL3Q9HAR2 1447 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 VWA3AA6NCI4 1184 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 USP17L3A6NCW0 530 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 USP17L4A6NCW7 530 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CCT5P48643 541 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 IRAK1P51617 712 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 SLC8A3P57103 927 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 GNG11P61952 73 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 KIF4BQ2VIQ3 1234 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ISM2Q6H9L7 571 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 USP17L2Q6R6M4 530 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 USP17L1Q7RTZ2 530 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CCDC83Q8IWF9 413 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 PGBD1Q96JS3 809 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 PUS7Q96PZ0 661 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 BAG1Q99933 345 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 TM6SF1Q9BZW5 370 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 XPO4Q9C0E2 1151 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ANKZF1Q9H8Y5 726 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 AMOTL2Q9Y2J4 779 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 CAPN7Q9Y6W3 813 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ARHGEF5Q12774 1597 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 AOX1Q06278 1338 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 SOS1Q07889 1333 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 RPGRIP1LQ68CZ1 1315 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 SALL3Q9BXA9 1300 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 KIAA0232Q92628 1395 aa5.44□□□□□ -1.54
SNRNP40-206ENST00000489853 ATP10DQ9P241 1426 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 STRCQ7RTU9 1775 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 SHTN1A0MZ66 631 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 ARHGAP6O43182 974 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 MYBL2P10244 700 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 ARID4AP29374 1257 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 ARHGAP25P42331 645 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 SERPINB4P48594 390 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 CCNHP51946 323 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 HNRNPMP52272 730 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 SMTNP53814 917 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 PLCB4Q15147 1175 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 RBBP5Q15291 538 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 WWC2Q6AWC2 1192 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 SAMD7Q7Z3H4 446 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 YTHDF3Q7Z739 585 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 KIAA1328Q86T90 577 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 AOPEPQ8N6M6 819 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 TCP11Q8WWU5 503 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 KCNB2Q92953 911 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 RILPL2Q969X0 211 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 KIFC2Q96AC6 838 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 CLIC6Q96NY7 704 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 SLC12A5Q9H2X9 1139 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 PLEKHA4Q9H4M7 779 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 KLC4Q9NSK0 619 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 IFNKQ9P0W0 207 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 CFAP45Q9UL16 551 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 GNEQ9Y223 722 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 PPP2R2CQ9Y2T4 447 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 RIMS1Q86UR5 1692 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 CDC42BPAQ5VT25 1732 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 UNC13BO14795 1591 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 USP32Q8NFA0 1604 aa5.43□□□□□ -1.54
SNRNP40-206ENST00000489853 CBFA2T2O43439 604 aa5.42□□□□□ -1.54
SNRNP40-206ENST00000489853 CUTAO60888 179 aa5.42□□□□□ -1.54
SNRNP40-206ENST00000489853 PHACTR2O75167 634 aa5.42□□□□□ -1.54
SNRNP40-206ENST00000489853 COQ9O75208 318 aa5.42□□□□□ -1.54
SNRNP40-206ENST00000489853 KIAA0754O94854 1291 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms