RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 SDR42E1Q8WUS8 393 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 TLL2Q9Y6L7 1015 aa20.73■□□□□ 0.91
SHROOM1-205ENST00000488072 GRM1Q13255 1194 aa20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 TNFAIP1Q13829 316 aa20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 UBE3CQ15386 1083 aa20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 SAPCD2Q86UD0 394 aa20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 FLT1P17948 1338 aa20.72■□□□□ 0.91
SHROOM1-205ENST00000488072 HUNKP57058 714 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 TTC22Q5TAA0 569 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 CYP4F22Q6NT55 531 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 EVI5LQ96CN4 794 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 CLMNQ96JQ2 1002 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 FAM227BQ96M60 508 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 OSBPL5Q9H0X9 879 aaPredicted RBP20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 PPP2R3BQ9Y5P8 575 aa20.71■□□□□ 0.91
SHROOM1-205ENST00000488072 ENTPD3O75355 529 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 CYP2D6P10635 497 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 ZSCAN29Q8IWY8 852 aaPredicted RBP20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 C2orf69Q8N8R5 385 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 PALD1Q9ULE6 856 aa20.7■□□□□ 0.9
SHROOM1-205ENST00000488072 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 A0A0D9SFI3 127 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 SDSP20132 328 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 ZMYM1Q5SVZ6 1142 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 PAXIP1Q6ZW49 1069 aaPredicted RBP20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 APPBP2Q92624 585 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 ATRNL1Q5VV63 1379 aa20.69■□□□□ 0.9
SHROOM1-205ENST00000488072 CYP2D7A0A087X1C5 515 aa20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 USP5P45974 858 aa20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 RRP1BQ14684 758 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 SUPT20HL1Q3ZLR7 823 aa20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 CSRNP1Q96S65 589 aa20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 STRBPQ96SI9 672 aaKnown RBP20.68■□□□□ 0.9
SHROOM1-205ENST00000488072 PLCG2P16885 1265 aa20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 NF2P35240 595 aa20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 VEGFBP49765 207 aa20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 SHROOM1Q2M3G4 852 aaPredicted RBP20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 CNKSR2Q8WXI2 1034 aa20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 IL25Q9H293 177 aa20.67■□□□□ 0.9
SHROOM1-205ENST00000488072 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 GPAA1O43292 621 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 IGSF3O75054 1194 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 AOC2O75106 756 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 INPP5BP32019 993 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 MKRN3Q13064 507 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 DEFB115Q30KQ5 88 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 LDLRAD1Q5T700 205 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 AIDAQ96BJ3 306 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 SLC4A4Q9Y6R1 1079 aa20.66■□□□□ 0.9
SHROOM1-205ENST00000488072 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 FOXP2O15409 715 aa20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 PLCD1P51178 756 aa20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 VPS53Q5VIR6 699 aa20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 ERICH6BQ5W0A0 696 aa20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 ZNF589Q86UQ0 364 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 ZKSCAN4Q969J2 545 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 CRNKL1Q9BZJ0 848 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 DNAJC18Q9H819 358 aa20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 EPB41L4AQ9HCS5 686 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 DCP1AQ9NPI6 582 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-205ENST00000488072 CDK5RAP2Q96SN8 1893 aa20.64■□□□□ 0.9
SHROOM1-205ENST00000488072 GSG1L2A8MUP6 293 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 JAG1P78504 1218 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 ARMC9Q7Z3E5 817 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 KLRG1Q96E93 195 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 ELP3Q9H9T3 547 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.89
SHROOM1-205ENST00000488072 MYH7P12883 1935 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 FAM155AB1AL88 458 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 PPP1R12BO60237 982 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 GJA5P36382 358 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 MAP3K11Q16584 847 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 RGMBQ6NW40 437 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 CCDC84Q86UT8 332 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 RASAL3Q86YV0 1011 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 CAPNS2Q96L46 248 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 WRNIP1Q96S55 665 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 MCM9Q9NXL9 1143 aa20.63■□□□□ 0.89
SHROOM1-205ENST00000488072 PHF20L1A8MW92 1017 aa20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 ZNF157P51786 506 aaPredicted RBP20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 VGLL4Q14135 290 aa20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 STK11IPQ8N1F8 1099 aa20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 DYNLL2Q96FJ2 89 aa20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 SIPA1L1O43166 1804 aa20.62■□□□□ 0.89
SHROOM1-205ENST00000488072 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 FKBP1BP68106 108 aa20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 TMED8Q6PL24 325 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms