RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SH2B1Q9NRF2 756 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 SULF1Q8IWU6 871 aa17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
POLR2J3-204ENST00000486319 WNT10BO00744 389 aa17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 CST9Q5W186 159 aa17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
POLR2J3-204ENST00000486319 PSME4Q14997 1843 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 FOXP2O15409 715 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 IGSF3O75054 1194 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 FGAP02671 866 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 GNAT2P19087 354 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 ABT1Q9ULW3 272 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-204ENST00000486319 ADM5C9JUS6 153 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 DLGAP5Q15398 846 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 RAI14Q9P0K7 980 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 ABCF2Q9UG63 623 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 MKRN1Q9UHC7 482 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 ZMYM6O95789 1325 aa17.27■□□□□ 0.36
POLR2J3-204ENST00000486319 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 E7EWF7 191 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 ZNF213O14771 459 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 ALX1Q15699 326 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 DLK2Q6UY11 383 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 PITPNM2Q9BZ72 1349 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 STOX1Q6ZVD7 989 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
POLR2J3-204ENST00000486319 MBD4O95243 580 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 APPP05067 770 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 CYP7A1P22680 504 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
POLR2J3-204ENST00000486319 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
POLR2J3-204ENST00000486319 ZBED3Q96IU2 234 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-204ENST00000486319 SCAF8Q9UPN6 1271 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-204ENST00000486319 PCNTO95613 3336 aa17.24■□□□□ 0.35
POLR2J3-204ENST00000486319 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 SPDYE2BA6NHP3 402 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 MYO1BO43795 1136 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 SPDYE6P0CI01 402 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 MCM4P33991 863 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 ME3Q16798 604 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 Q6ZUG5 572 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 NACAP1Q9BZK3 213 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 SERPINA10Q9UK55 444 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 PCDHAC2Q9Y5I4 1007 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
POLR2J3-204ENST00000486319 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 LARGE1O95461 756 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 FGD1P98174 961 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 GRIK5Q16478 980 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 SAPCD2Q86UD0 394 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 IFNL3Q8IZI9 196 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 JMYQ8N9B5 988 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 NCOA7Q8NI08 942 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 CDCA5Q96FF9 252 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 PRMT6Q96LA8 375 aaPredicted RBP17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 ZNF646O15015 1829 aaPredicted RBP17.22■□□□□ 0.35
POLR2J3-204ENST00000486319 HAND2P61296 217 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 FBXL16Q8N461 479 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 NAPBQ9H115 298 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.35
POLR2J3-204ENST00000486319 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms