RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SSH3Q8TE77 659 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 ZNF384Q8TF68 577 aa31.65■■■□□ 2.66
HLA-F-227ENST00000485513 PHF20L1A8MW92 1017 aa31.64■■■□□ 2.66
HLA-F-227ENST00000485513 UQCRFS1P1P0C7P4 283 aa31.64■■■□□ 2.66
HLA-F-227ENST00000485513 GSTO1P78417 241 aa31.64■■■□□ 2.66
HLA-F-227ENST00000485513 ANKRD23Q86SG2 305 aa31.64■■■□□ 2.66
HLA-F-227ENST00000485513 DDTLA6NHG4 134 aaPredicted RBP31.63■■■□□ 2.65
HLA-F-227ENST00000485513 LDHCP07864 332 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 MCAMP43121 646 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 OS9Q13438 667 aaPredicted RBP31.63■■■□□ 2.65
HLA-F-227ENST00000485513 ITPRIPQ8IWB1 547 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 NSUN4Q96CB9 384 aaKnown RBP31.63■■■□□ 2.65
HLA-F-227ENST00000485513 C1orf115Q9H7X2 142 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 GPR108Q9NPR9 543 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 RAI14Q9P0K7 980 aa31.63■■■□□ 2.65
HLA-F-227ENST00000485513 RHBDL3P58872 404 aa31.62■■■□□ 2.65
HLA-F-227ENST00000485513 KIF22Q14807 665 aa31.62■■■□□ 2.65
HLA-F-227ENST00000485513 ARMC5Q96C12 935 aa31.62■■■□□ 2.65
HLA-F-227ENST00000485513 RLBP1P12271 317 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 MAP3K10Q02779 954 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 TNNI3KQ59H18 835 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 SCYL3Q8IZE3 742 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 PICK1Q9NRD5 415 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 FPGT-TNNI3KV9GXZ4 949 aa31.61■■■□□ 2.65
HLA-F-227ENST00000485513 PDHXO00330 501 aa31.6■■■□□ 2.65
HLA-F-227ENST00000485513 CXCL11O14625 94 aa31.6■■■□□ 2.65
HLA-F-227ENST00000485513 SURF6O75683 361 aaKnown RBP31.6■■■□□ 2.65
HLA-F-227ENST00000485513 LACTBP83111 547 aaPredicted RBP31.6■■■□□ 2.65
HLA-F-227ENST00000485513 LRP2BPQ9P2M1 347 aa31.6■■■□□ 2.65
HLA-F-227ENST00000485513 CENPFP49454 3210 aa31.59■■■□□ 2.65
HLA-F-227ENST00000485513 ZBED9Q6R2W3 1325 aa31.59■■■□□ 2.65
HLA-F-227ENST00000485513 ZBTB7BO15156 539 aaPredicted RBP31.59■■■□□ 2.65
HLA-F-227ENST00000485513 NPM3O75607 178 aaKnown RBP31.59■■■□□ 2.65
HLA-F-227ENST00000485513 MAP4K4O95819 1239 aaPredicted RBP31.59■■■□□ 2.65
HLA-F-227ENST00000485513 MOGSQ13724 837 aa31.59■■■□□ 2.65
HLA-F-227ENST00000485513 PTCH2Q9Y6C5 1203 aa31.59■■■□□ 2.65
HLA-F-227ENST00000485513 POTEFA5A3E0 1075 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 TTC39AQ5SRH9 613 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 C17orf99Q6UX52 265 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 ARHGAP39Q9C0H5 1083 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 ZHX2Q9Y6X8 837 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 ZSWIM8A7E2V4 1837 aa31.58■■■□□ 2.65
HLA-F-227ENST00000485513 KIAA0100Q14667 2235 aaKnown RBP31.57■■■□□ 2.65
HLA-F-227ENST00000485513 SLURP2P0DP57 97 aa31.57■■■□□ 2.64
HLA-F-227ENST00000485513 PTPRAP18433 802 aa31.57■■■□□ 2.64
HLA-F-227ENST00000485513 CCDC158Q5M9N0 1113 aa31.57■■■□□ 2.64
HLA-F-227ENST00000485513 DBNDD2Q9BQY9 259 aa31.57■■■□□ 2.64
HLA-F-227ENST00000485513 CPA4Q9UI42 421 aa31.57■■■□□ 2.64
HLA-F-227ENST00000485513 RBBP6Q7Z6E9 1792 aaKnown RBP31.56■■■□□ 2.64
HLA-F-227ENST00000485513 CTNND1O60716 968 aaKnown RBP31.56■■■□□ 2.64
HLA-F-227ENST00000485513 SLC9C1Q4G0N8 1177 aa31.56■■■□□ 2.64
HLA-F-227ENST00000485513 SNRKQ9NRH2 765 aa31.56■■■□□ 2.64
HLA-F-227ENST00000485513 NOP58Q9Y2X3 529 aaKnown RBP31.56■■■□□ 2.64
HLA-F-227ENST00000485513 DOCK1Q14185 1865 aa31.56■■■□□ 2.64
HLA-F-227ENST00000485513 NBPF11Q86T75 865 aa31.55■■■□□ 2.64
HLA-F-227ENST00000485513 ADGRA2Q96PE1 1338 aa31.54■■■□□ 2.64
HLA-F-227ENST00000485513 GNRH1P01148 92 aa31.54■■■□□ 2.64
HLA-F-227ENST00000485513 GPAT2Q6NUI2 795 aa31.54■■■□□ 2.64
HLA-F-227ENST00000485513 ZNF333Q96JL9 665 aa31.54■■■□□ 2.64
HLA-F-227ENST00000485513 AFG3L2Q9Y4W6 797 aa31.54■■■□□ 2.64
HLA-F-227ENST00000485513 A0A0G2JLL6 359 aaPredicted RBP31.53■■■□□ 2.64
HLA-F-227ENST00000485513 TBC1D12O60347 775 aa31.53■■■□□ 2.64
HLA-F-227ENST00000485513 FASTKD5Q7L8L6 764 aaKnown RBP31.53■■■□□ 2.64
HLA-F-227ENST00000485513 PRRT2Q7Z6L0 340 aaPredicted RBP31.53■■■□□ 2.64
HLA-F-227ENST00000485513 TEX11Q8IYF3 940 aa31.53■■■□□ 2.64
HLA-F-227ENST00000485513 PARK7Q99497 189 aaKnown RBP31.53■■■□□ 2.64
HLA-F-227ENST00000485513 NOL10Q9BSC4 688 aaKnown RBP31.53■■■□□ 2.64
HLA-F-227ENST00000485513 COL2A1P02458 1487 aaPredicted RBP31.52■■■□□ 2.64
HLA-F-227ENST00000485513 PRPF38BQ5VTL8 546 aaKnown RBP31.52■■■□□ 2.64
HLA-F-227ENST00000485513 NAA16Q6N069 864 aaPredicted RBP31.52■■■□□ 2.64
HLA-F-227ENST00000485513 OSBPL5Q9H0X9 879 aaPredicted RBP31.52■■■□□ 2.64
HLA-F-227ENST00000485513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.52■■■□□ 2.64
HLA-F-227ENST00000485513 MAST2Q6P0Q8 1798 aa31.51■■■□□ 2.64
HLA-F-227ENST00000485513 ECM2O94769 699 aaPredicted RBP31.51■■■□□ 2.63
HLA-F-227ENST00000485513 ZNF512BQ96KM6 892 aaPredicted RBP31.51■■■□□ 2.63
HLA-F-227ENST00000485513 PHIPQ8WWQ0 1821 aa31.51■■■□□ 2.63
HLA-F-227ENST00000485513 PTPRFP10586 1907 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 FAM196BA6NMK8 535 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 PSMC4P43686 418 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 PRMT2P55345 433 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 GADL1Q6ZQY3 521 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 SH3RF3Q8TEJ3 882 aaPredicted RBP31.5■■■□□ 2.63
HLA-F-227ENST00000485513 TMEM106CQ9BVX2 250 aa31.5■■■□□ 2.63
HLA-F-227ENST00000485513 BAG3O95817 575 aa31.49■■■□□ 2.63
HLA-F-227ENST00000485513 CYP2E1P05181 493 aaPredicted RBP31.49■■■□□ 2.63
HLA-F-227ENST00000485513 CEP85Q6P2H3 762 aa31.49■■■□□ 2.63
HLA-F-227ENST00000485513 DBNLQ9UJU6 430 aaKnown RBP31.49■■■□□ 2.63
HLA-F-227ENST00000485513 CYP2C8P10632 490 aa31.48■■■□□ 2.63
HLA-F-227ENST00000485513 CTGFP29279 349 aa31.48■■■□□ 2.63
HLA-F-227ENST00000485513 PANK1Q8TE04 598 aa31.48■■■□□ 2.63
HLA-F-227ENST00000485513 TRIM47Q96LD4 638 aa31.48■■■□□ 2.63
HLA-F-227ENST00000485513 AATFQ9NY61 560 aaKnown RBP eCLIP31.48■■■□□ 2.63
HLA-F-227ENST00000485513 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.48■■■□□ 2.63
HLA-F-227ENST00000485513 MYO5AQ9Y4I1 1855 aaKnown RBP31.47■■■□□ 2.63
HLA-F-227ENST00000485513 TRIM75PA6NK02 468 aa31.47■■■□□ 2.63
HLA-F-227ENST00000485513 PLCG2P16885 1265 aa31.47■■■□□ 2.63
HLA-F-227ENST00000485513 EN2P19622 333 aaPredicted RBP31.47■■■□□ 2.63
HLA-F-227ENST00000485513 ZAP70P43403 619 aa31.47■■■□□ 2.63
HLA-F-227ENST00000485513 CCDC8Q9H0W5 538 aaPredicted RBP31.47■■■□□ 2.63
HLA-F-227ENST00000485513 TLR7Q9NYK1 1049 aaKnown RBP31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms