RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 GLIS3Q8NEA6 775 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 CCDC74AQ96AQ1 378 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
SSBP1-211ENST00000484178 CCDC86Q9H6F5 360 aaKnown RBP6.92□□□□□ -1.3
SSBP1-211ENST00000484178 VAV3Q9UKW4 847 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 CCDC88BA6NC98 1476 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 CEP164Q9UPV0 1460 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 SMARCA2P51531 1590 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 FUT4P22083 530 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 PDE4CQ08493 712 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 FAAP100Q0VG06 881 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 DIEXFQ68CQ4 756 aaKnown RBP6.91□□□□□ -1.3
SSBP1-211ENST00000484178 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-211ENST00000484178 ALKBH8Q96BT7 664 aaKnown RBP6.91□□□□□ -1.3
SSBP1-211ENST00000484178 WDR89Q96FK6 387 aaPredicted RBP6.91□□□□□ -1.3
SSBP1-211ENST00000484178 DISC1Q9NRI5 854 aa6.91□□□□□ -1.3
SSBP1-211ENST00000484178 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.3
SSBP1-211ENST00000484178 ZNF862O60290 1169 aa6.9□□□□□ -1.3
SSBP1-211ENST00000484178 GSTP1P09211 210 aaKnown RBP6.9□□□□□ -1.3
SSBP1-211ENST00000484178 LIG1P18858 919 aa6.9□□□□□ -1.3
SSBP1-211ENST00000484178 SERPINB4P48594 390 aa6.9□□□□□ -1.3
SSBP1-211ENST00000484178 PRKCQQ04759 706 aa6.9□□□□□ -1.3
SSBP1-211ENST00000484178 SMYD4Q8IYR2 804 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-211ENST00000484178 PIDD1Q9HB75 910 aa6.9□□□□□ -1.3
SSBP1-211ENST00000484178 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-211ENST00000484178 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.31
SSBP1-211ENST00000484178 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
SSBP1-211ENST00000484178 PDZD3Q86UT5 571 aa6.89□□□□□ -1.31
SSBP1-211ENST00000484178 PLD6Q8N2A8 252 aaKnown RBP6.89□□□□□ -1.31
SSBP1-211ENST00000484178 KIF21BO75037 1637 aa6.89□□□□□ -1.31
SSBP1-211ENST00000484178 PATL2C9JE40 543 aaKnown RBP6.88□□□□□ -1.31
SSBP1-211ENST00000484178 GPR182O15218 404 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 CD8BP10966 210 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
SSBP1-211ENST00000484178 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 GRM2Q14416 872 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 IFI16Q16666 785 aaKnown RBP6.88□□□□□ -1.31
SSBP1-211ENST00000484178 DMRTB1Q96MA1 342 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 PCOLCE2Q9UKZ9 415 aa6.88□□□□□ -1.31
SSBP1-211ENST00000484178 BNIP3Q12983 259 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 DUSP23Q9BVJ7 150 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 RBCK1Q9BYM8 510 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 LGR6Q9HBX8 967 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 TMEM39AQ9NV64 488 aa6.87□□□□□ -1.31
SSBP1-211ENST00000484178 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-211ENST00000484178 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
SSBP1-211ENST00000484178 OXCT1P55809 520 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 TTLL4Q14679 1199 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 NIF3L1Q9GZT8 377 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 TNKS2Q9H2K2 1166 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 MBNL3Q9NUK0 354 aaKnown RBP6.86□□□□□ -1.31
SSBP1-211ENST00000484178 CACNA2D2Q9NY47 1150 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 SNX11Q9Y5W9 270 aa6.86□□□□□ -1.31
SSBP1-211ENST00000484178 TMEM265A0A087WTH1 108 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 CEACAM5P06731 702 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 ERVK-24P63145 666 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 KCNA1Q09470 495 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 ZC3H12AQ5D1E8 599 aaKnown RBP6.85□□□□□ -1.31
SSBP1-211ENST00000484178 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 HRASLS5Q96KN8 279 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 RC3H2Q9HBD1 1191 aaKnown RBP6.85□□□□□ -1.31
SSBP1-211ENST00000484178 ADAMTS6Q9UKP5 1117 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 U3KQE9 123 aa6.85□□□□□ -1.31
SSBP1-211ENST00000484178 FARP2O94887 1054 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-211ENST00000484178 NEFMP07197 916 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
SSBP1-211ENST00000484178 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-211ENST00000484178 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 RNF214Q8ND24 703 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 EPS8L3Q8TE67 593 aaKnown RBP6.84□□□□□ -1.31
SSBP1-211ENST00000484178 ZNF428Q96B54 188 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
SSBP1-211ENST00000484178 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 PLAGL2Q9UPG8 496 aa6.84□□□□□ -1.31
SSBP1-211ENST00000484178 VPS8Q8N3P4 1428 aa6.84□□□□□ -1.32
SSBP1-211ENST00000484178 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 IGF2BP3O00425 579 aaKnown RBP eCLIP6.83□□□□□ -1.32
SSBP1-211ENST00000484178 LEFTY1O75610 366 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 BRD1O95696 1058 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
SSBP1-211ENST00000484178 AOC3Q16853 763 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 SLC23A3Q6PIS1 610 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 FLAD1Q8NFF5 587 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 FAM168AQ92567 244 aa6.83□□□□□ -1.32
SSBP1-211ENST00000484178 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ARNTP27540 789 aa6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ZNF252P-AS1Q0IIN9 211 aa6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ZNF648Q5T619 568 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ANGEL2Q5VTE6 544 aaKnown RBP6.82□□□□□ -1.32
SSBP1-211ENST00000484178 FAM214BQ7L5A3 538 aa6.82□□□□□ -1.32
SSBP1-211ENST00000484178 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
SSBP1-211ENST00000484178 LRRN4CLQ8ND94 238 aa6.82□□□□□ -1.32
SSBP1-211ENST00000484178 BHLHE22Q8NFJ8 381 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ISL2Q96A47 359 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms