RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PTPN22Q9Y2R2 807 aa22.87■■□□□ 1.25
CLK1-211ENST00000481641 ATRNL1Q5VV63 1379 aa22.87■■□□□ 1.25
CLK1-211ENST00000481641 ZBED9Q6R2W3 1325 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 GPR75-ASB3A0A0A6YYF3 556 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 SURF6O75683 361 aaKnown RBP22.86■■□□□ 1.25
CLK1-211ENST00000481641 RHBDL3P58872 404 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 TNNI3KQ59H18 835 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 NSUN4Q96CB9 384 aaKnown RBP22.86■■□□□ 1.25
CLK1-211ENST00000481641 DBNDD2Q9BQY9 259 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 SNRKQ9NRH2 765 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 RAI14Q9P0K7 980 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 FPGT-TNNI3KV9GXZ4 949 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 DOCK2Q92608 1830 aa22.86■■□□□ 1.25
CLK1-211ENST00000481641 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
CLK1-211ENST00000481641 NOL9Q5SY16 702 aaKnown RBP22.85■■□□□ 1.25
CLK1-211ENST00000481641 UQCRFS1P1P0C7P4 283 aa22.84■■□□□ 1.25
CLK1-211ENST00000481641 PANK1Q8TE04 598 aa22.84■■□□□ 1.25
CLK1-211ENST00000481641 KCNH4Q9UQ05 1017 aa22.84■■□□□ 1.25
CLK1-211ENST00000481641 ZSWIM8A7E2V4 1837 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 TLR2O60603 784 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 ECM2O94769 699 aaPredicted RBP22.83■■□□□ 1.25
CLK1-211ENST00000481641 MOGSQ13724 837 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 TTC39AQ5SRH9 613 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 ARHGAP39Q9C0H5 1083 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 GPR108Q9NPR9 543 aa22.83■■□□□ 1.25
CLK1-211ENST00000481641 PDE4DIPQ5VU43 2346 aa22.82■■□□□ 1.24
CLK1-211ENST00000481641 GSTO1P78417 241 aa22.82■■□□□ 1.24
CLK1-211ENST00000481641 ZCCHC17Q9NP64 241 aaKnown RBP22.82■■□□□ 1.24
CLK1-211ENST00000481641 LRP2BPQ9P2M1 347 aa22.82■■□□□ 1.24
CLK1-211ENST00000481641 CENPFP49454 3210 aa22.82■■□□□ 1.24
CLK1-211ENST00000481641 PDHXO00330 501 aa22.81■■□□□ 1.24
CLK1-211ENST00000481641 LDHCP07864 332 aa22.81■■□□□ 1.24
CLK1-211ENST00000481641 MAP3K10Q02779 954 aa22.81■■□□□ 1.24
CLK1-211ENST00000481641 ANKRD23Q86SG2 305 aa22.81■■□□□ 1.24
CLK1-211ENST00000481641 SCYL3Q8IZE3 742 aa22.81■■□□□ 1.24
CLK1-211ENST00000481641 TLR7Q9NYK1 1049 aaKnown RBP22.81■■□□□ 1.24
CLK1-211ENST00000481641 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.81■■□□□ 1.24
CLK1-211ENST00000481641 NOP58Q9Y2X3 529 aaKnown RBP22.81■■□□□ 1.24
CLK1-211ENST00000481641 FAM196BA6NMK8 535 aa22.8■■□□□ 1.24
CLK1-211ENST00000481641 CCDC158Q5M9N0 1113 aa22.8■■□□□ 1.24
CLK1-211ENST00000481641 CCDC8Q9H0W5 538 aaPredicted RBP22.8■■□□□ 1.24
CLK1-211ENST00000481641 CPA4Q9UI42 421 aa22.8■■□□□ 1.24
CLK1-211ENST00000481641 ZHX2Q9Y6X8 837 aa22.8■■□□□ 1.24
CLK1-211ENST00000481641 POTEFA5A3E0 1075 aa22.79■■□□□ 1.24
CLK1-211ENST00000481641 PTPRAP18433 802 aa22.79■■□□□ 1.24
CLK1-211ENST00000481641 CEP85Q6P2H3 762 aa22.79■■□□□ 1.24
CLK1-211ENST00000481641 CCDC84Q86UT8 332 aaPredicted RBP22.79■■□□□ 1.24
CLK1-211ENST00000481641 PICK1Q9NRD5 415 aa22.79■■□□□ 1.24
CLK1-211ENST00000481641 DBNLQ9UJU6 430 aaKnown RBP22.79■■□□□ 1.24
CLK1-211ENST00000481641 PTCH2Q9Y6C5 1203 aa22.79■■□□□ 1.24
CLK1-211ENST00000481641 MYO5AQ9Y4I1 1855 aaKnown RBP22.79■■□□□ 1.24
CLK1-211ENST00000481641 CYP2E1P05181 493 aaPredicted RBP22.78■■□□□ 1.24
CLK1-211ENST00000481641 LACTBP83111 547 aaPredicted RBP22.78■■□□□ 1.24
CLK1-211ENST00000481641 GPAT2Q6NUI2 795 aa22.78■■□□□ 1.24
CLK1-211ENST00000481641 C17orf99Q6UX52 265 aa22.78■■□□□ 1.24
CLK1-211ENST00000481641 SH3RF3Q8TEJ3 882 aaPredicted RBP22.78■■□□□ 1.24
CLK1-211ENST00000481641 CXCL11O14625 94 aa22.77■■□□□ 1.24
CLK1-211ENST00000481641 ZAP70P43403 619 aa22.77■■□□□ 1.24
CLK1-211ENST00000481641 TEX11Q8IYF3 940 aa22.77■■□□□ 1.24
CLK1-211ENST00000481641 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
CLK1-211ENST00000481641 EAF2Q96CJ1 260 aaPredicted RBP22.77■■□□□ 1.24
CLK1-211ENST00000481641 KIAA0100Q14667 2235 aaKnown RBP22.77■■□□□ 1.24
CLK1-211ENST00000481641 CTNND1O60716 968 aaKnown RBP22.76■■□□□ 1.23
CLK1-211ENST00000481641 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
CLK1-211ENST00000481641 CTGFP29279 349 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 KIF22Q14807 665 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 ARHGEF6Q15052 776 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 NAA16Q6N069 864 aaPredicted RBP22.76■■□□□ 1.23
CLK1-211ENST00000481641 ADGRA1Q86SQ6 560 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 OSBPL5Q9H0X9 879 aaPredicted RBP22.76■■□□□ 1.23
CLK1-211ENST00000481641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.76■■□□□ 1.23
CLK1-211ENST00000481641 PIH1D3Q9NQM4 214 aaKnown RBP22.76■■□□□ 1.23
CLK1-211ENST00000481641 AATFQ9NY61 560 aaKnown RBP eCLIP22.76■■□□□ 1.23
CLK1-211ENST00000481641 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 AFG3L2Q9Y4W6 797 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 ADGRA2Q96PE1 1338 aa22.76■■□□□ 1.23
CLK1-211ENST00000481641 DOCK1Q14185 1865 aa22.75■■□□□ 1.23
CLK1-211ENST00000481641 CYP2C8P10632 490 aa22.75■■□□□ 1.23
CLK1-211ENST00000481641 GADL1Q6ZQY3 521 aa22.75■■□□□ 1.23
CLK1-211ENST00000481641 PHIPQ8WWQ0 1821 aa22.75■■□□□ 1.23
CLK1-211ENST00000481641 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
CLK1-211ENST00000481641 TBC1D12O60347 775 aa22.74■■□□□ 1.23
CLK1-211ENST00000481641 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
CLK1-211ENST00000481641 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
CLK1-211ENST00000481641 NOL10Q9BSC4 688 aaKnown RBP22.74■■□□□ 1.23
CLK1-211ENST00000481641 NDUFB9Q9Y6M9 179 aa22.74■■□□□ 1.23
CLK1-211ENST00000481641 TRIM75PA6NK02 468 aa22.73■■□□□ 1.23
CLK1-211ENST00000481641 MYCP01106 439 aaPredicted RBP22.73■■□□□ 1.23
CLK1-211ENST00000481641 RRP1BQ14684 758 aaKnown RBP22.73■■□□□ 1.23
CLK1-211ENST00000481641 SLC9C1Q4G0N8 1177 aa22.73■■□□□ 1.23
CLK1-211ENST00000481641 ZNF512BQ96KM6 892 aaPredicted RBP22.73■■□□□ 1.23
CLK1-211ENST00000481641 MAST2Q6P0Q8 1798 aa22.73■■□□□ 1.23
CLK1-211ENST00000481641 PSMC4P43686 418 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 SH3TC2Q8TF17 1288 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 TGFBRAP1Q8WUH2 860 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 ZNF333Q96JL9 665 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 TRIM47Q96LD4 638 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 PARK7Q99497 189 aaKnown RBP22.72■■□□□ 1.23
CLK1-211ENST00000481641 PTPRFP10586 1907 aa22.72■■□□□ 1.23
CLK1-211ENST00000481641 BAG3O95817 575 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms