RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SHHQ15465 462 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 FAM110CQ1W6H9 321 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 LHX8Q68G74 356 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 HHIPL2Q6UWX4 724 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 LDHAL6AQ6ZMR3 332 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 FBXO33Q7Z6M2 555 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 TRIB2Q92519 343 aa9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 LBHD1Q9BQE6 289 aaPredicted RBP9.36□□□□□ -0.91
SPTLC1-205ENST00000477888 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 SCYL3Q8IZE3 742 aa9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 USP38Q8NB14 1042 aa9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 TBC1D22AQ8WUA7 517 aa9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 ZNF594Q96JF6 807 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
SPTLC1-205ENST00000477888 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 TCP10Q12799 353 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 NFIAQ12857 509 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 C9orf50Q5SZB4 431 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 G2E3Q7L622 706 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 SUGT1Q9Y2Z0 365 aa9.34□□□□□ -0.91
SPTLC1-205ENST00000477888 ARAP2Q8WZ64 1704 aa9.34□□□□□ -0.92
SPTLC1-205ENST00000477888 XRCC5P13010 732 aaKnown RBP9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 GNAI1P63096 354 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 MAP3K10Q02779 954 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 CHAF1AQ13111 956 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 TREML2Q5T2D2 321 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 CDC42EP5Q6NZY7 148 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 LMBR1LQ6UX01 489 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 ZFPM1Q8IX07 1006 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
SPTLC1-205ENST00000477888 CYP2B6P20813 491 aa9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 GCLCP48506 637 aaPredicted RBP9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 CACNB2Q08289 660 aaPredicted RBP9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 CCDC57Q2TAC2 916 aa9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 EPHA10Q5JZY3 1008 aa9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 ATXN2LQ8WWM7 1075 aaKnown RBP9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 SENP6Q9GZR1 1112 aaPredicted RBP9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 ATRNL1Q5VV63 1379 aa9.32□□□□□ -0.92
SPTLC1-205ENST00000477888 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 GRIN2CQ14957 1233 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 VPS37DQ86XT2 251 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 ASB2Q96Q27 587 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 PUS3Q9BZE2 481 aaKnown RBP9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 SPINK5Q9NQ38 1064 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 PNMA3Q9UL41 463 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 DDX60LQ5H9U9 1706 aaKnown RBP9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 MAST3O60307 1309 aa9.31□□□□□ -0.92
SPTLC1-205ENST00000477888 CTNND1O60716 968 aaKnown RBP9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 FRAT2O75474 233 aaPredicted RBP9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 ADAMTS19Q8TE59 1207 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 USP6NLQ92738 828 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 STK31Q9BXU1 1019 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 PRKAG2Q9UGJ0 569 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 ADAMTS8Q9UP79 889 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 DAGLAQ9Y4D2 1042 aa9.3□□□□□ -0.92
SPTLC1-205ENST00000477888 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 CAVIN4Q5BKX8 364 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 SH3BP5LQ7L8J4 393 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 CCDC84Q86UT8 332 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 BADQ92934 168 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 USP40Q9NVE5 1235 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 MORF4L1Q9UBU8 362 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 U3KPZ7 1027 aaPredicted RBP9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 MGAMO43451 1857 aa9.29□□□□□ -0.92
SPTLC1-205ENST00000477888 RTP1P59025 263 aa9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 FLIIQ13045 1269 aa9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 SOCS4Q8WXH5 440 aa9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 UHRF1Q96T88 793 aaPredicted RBP9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 C1QTNF1Q9BXJ1 281 aa9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-205ENST00000477888 MROH5Q6ZUA9 1318 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms