RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
CCNL1-219ENST00000477127 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
CCNL1-219ENST00000477127 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
CCNL1-219ENST00000477127 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 CACNB3P54284 484 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 KIF22Q14807 665 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 TMEM106CQ9BVX2 250 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 SNCAIPQ9Y6H5 919 aa16.64■□□□□ 0.25
CCNL1-219ENST00000477127 TLR2O60603 784 aa16.63■□□□□ 0.25
CCNL1-219ENST00000477127 GNRH1P01148 92 aa16.63■□□□□ 0.25
CCNL1-219ENST00000477127 PPATQ06203 517 aa16.63■□□□□ 0.25
CCNL1-219ENST00000477127 PPIL2Q13356 520 aa16.63■□□□□ 0.25
CCNL1-219ENST00000477127 ZNF341Q9BYN7 854 aa16.63■□□□□ 0.25
CCNL1-219ENST00000477127 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
CCNL1-219ENST00000477127 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
CCNL1-219ENST00000477127 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
CCNL1-219ENST00000477127 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
CCNL1-219ENST00000477127 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
CCNL1-219ENST00000477127 FAM151AQ8WW52 585 aa16.62■□□□□ 0.25
CCNL1-219ENST00000477127 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
CCNL1-219ENST00000477127 HTTP42858 3142 aa16.62■□□□□ 0.25
CCNL1-219ENST00000477127 IRF6O14896 467 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
CCNL1-219ENST00000477127 CIAO1O76071 339 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 PRMT2P55345 433 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 POLA2Q14181 598 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
CCNL1-219ENST00000477127 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 CEP126Q9P2H0 1117 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 PDE1AP54750 535 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 STAP2Q9UGK3 403 aa16.61■□□□□ 0.25
CCNL1-219ENST00000477127 RBBP6Q7Z6E9 1792 aaKnown RBP16.6■□□□□ 0.25
CCNL1-219ENST00000477127 PNMA6EA0A0J9YXQ4 647 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 SEMA3EO15041 775 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 SDSP20132 328 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 ZNF112Q9UJU3 913 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
CCNL1-219ENST00000477127 SALL3Q9BXA9 1300 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 LDHBP07195 334 aaKnown RBP16.59■□□□□ 0.25
CCNL1-219ENST00000477127 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
CCNL1-219ENST00000477127 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
CCNL1-219ENST00000477127 CAP1Q01518 475 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 ATP2B3Q16720 1220 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
CCNL1-219ENST00000477127 APBB1O00213 710 aa16.58■□□□□ 0.24
CCNL1-219ENST00000477127 MTX1Q13505 466 aa16.58■□□□□ 0.24
CCNL1-219ENST00000477127 CDC42EP5Q6NZY7 148 aa16.58■□□□□ 0.24
CCNL1-219ENST00000477127 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
CCNL1-219ENST00000477127 ANKRD23Q86SG2 305 aa16.58■□□□□ 0.24
CCNL1-219ENST00000477127 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.24
CCNL1-219ENST00000477127 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
CCNL1-219ENST00000477127 PRDX5P30044 214 aa16.57■□□□□ 0.24
CCNL1-219ENST00000477127 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
CCNL1-219ENST00000477127 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
CCNL1-219ENST00000477127 KCNH4Q9UQ05 1017 aa16.57■□□□□ 0.24
CCNL1-219ENST00000477127 REC8O95072 547 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 MX1P20591 662 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 HOXD10P28358 340 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 INPP5BP32019 993 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 TCP10Q12799 353 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 NOL9Q5SY16 702 aaKnown RBP16.56■□□□□ 0.24
CCNL1-219ENST00000477127 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 SIL1Q9H173 461 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 CENPFP49454 3210 aa16.56■□□□□ 0.24
CCNL1-219ENST00000477127 DEKP35659 375 aaKnown RBP16.55■□□□□ 0.24
CCNL1-219ENST00000477127 DIXDC1Q155Q3 683 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 KIF2CQ99661 725 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 CHMP5Q9NZZ3 219 aa16.55■□□□□ 0.24
CCNL1-219ENST00000477127 PDHXO00330 501 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 CXCL11O14625 94 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 RABEP1Q15276 862 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 MKI67P46013 3256 aaKnown RBP16.54■□□□□ 0.24
CCNL1-219ENST00000477127 ERC2O15083 957 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 SRGAP3O43295 1099 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 ENTPD3O75355 529 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
CCNL1-219ENST00000477127 NFIAQ12857 509 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
CCNL1-219ENST00000477127 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 FAM198AQ9UFP1 575 aa16.54■□□□□ 0.24
CCNL1-219ENST00000477127 PDS5AQ29RF7 1337 aaKnown RBP16.54■□□□□ 0.24
CCNL1-219ENST00000477127 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
CCNL1-219ENST00000477127 PHKA1P46020 1223 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms