RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
SMPD4-217ENST00000473720 HMG20BQ9P0W2 317 aa14.73□□□□□ -0.05
SMPD4-217ENST00000473720 GAKO14976 1311 aa14.72□□□□□ -0.05
SMPD4-217ENST00000473720 POTEFA5A3E0 1075 aa14.72□□□□□ -0.05
SMPD4-217ENST00000473720 DDTLA6NHG4 134 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-217ENST00000473720 KIF22Q14807 665 aa14.72□□□□□ -0.05
SMPD4-217ENST00000473720 ARHGAP39Q9C0H5 1083 aa14.72□□□□□ -0.05
SMPD4-217ENST00000473720 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
SMPD4-217ENST00000473720 SIPA1L1O43166 1804 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 PDS5AQ29RF7 1337 aaKnown RBP14.71□□□□□ -0.05
SMPD4-217ENST00000473720 PDHXO00330 501 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 TLR2O60603 784 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 ENTPD3O75355 529 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.05
SMPD4-217ENST00000473720 MCAMP43121 646 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 ARHGEF6Q15052 776 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 SH3BP5LQ7L8J4 393 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 IDI2Q9BXS1 227 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 LRP2BPQ9P2M1 347 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 CPA4Q9UI42 421 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 ZNF112Q9UJU3 913 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 PTCH2Q9Y6C5 1203 aa14.71□□□□□ -0.05
SMPD4-217ENST00000473720 FAM196BA6NMK8 535 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 RLBP1P12271 317 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 ARID4AP29374 1257 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-217ENST00000473720 ATP8B2P98198 1209 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 SLC9C1Q4G0N8 1177 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 PICK1Q9NRD5 415 aa14.7□□□□□ -0.06
SMPD4-217ENST00000473720 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-217ENST00000473720 GPR75-ASB3A0A0A6YYF3 556 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 LDHCP07864 332 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 UQCRFS1P1P0C7P4 283 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 GSTO1P78417 241 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 POLA2Q14181 598 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 TNNI3KQ59H18 835 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 NOL9Q5SY16 702 aaKnown RBP14.69□□□□□ -0.06
SMPD4-217ENST00000473720 GADL1Q6ZQY3 521 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 SCYL3Q8IZE3 742 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 NSUN4Q96CB9 384 aaKnown RBP14.69□□□□□ -0.06
SMPD4-217ENST00000473720 FAM163AQ96GL9 167 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-217ENST00000473720 DBNDD2Q9BQY9 259 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
SMPD4-217ENST00000473720 ZHX2Q9Y6X8 837 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 FPGT-TNNI3KV9GXZ4 949 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 HTTP42858 3142 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
SMPD4-217ENST00000473720 MYH8P13535 1937 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 PHF20L1A8MW92 1017 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 PTPRAP18433 802 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 LACTBP83111 547 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-217ENST00000473720 CCDC158Q5M9N0 1113 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 ANKRD23Q86SG2 305 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 CCDC84Q86UT8 332 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-217ENST00000473720 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.68□□□□□ -0.064e-6■■□□□ 13.5
SMPD4-217ENST00000473720 ZCCHC17Q9NP64 241 aaKnown RBP14.68□□□□□ -0.06
SMPD4-217ENST00000473720 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 ATRNL1Q5VV63 1379 aa14.68□□□□□ -0.06
SMPD4-217ENST00000473720 ZBTB22O15209 634 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 EN2P19622 333 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-217ENST00000473720 RHBDL3P58872 404 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 SLC4A8Q2Y0W8 1093 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-217ENST00000473720 NBPF11Q86T75 865 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 TEX11Q8IYF3 940 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 SSH3Q8TE77 659 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 SH3TC2Q8TF17 1288 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-217ENST00000473720 AATFQ9NY61 560 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMPD4-217ENST00000473720 LOC285556D6RIA3 1793 aa14.67□□□□□ -0.06
SMPD4-217ENST00000473720 TRIM75PA6NK02 468 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-217ENST00000473720 FMNL1O95466 1100 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-217ENST00000473720 CYP2C8P10632 490 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 PSMC4P43686 418 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 C17orf99Q6UX52 265 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 PANK1Q8TE04 598 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-217ENST00000473720 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 MYH7P12883 1935 aa14.66□□□□□ -0.06
SMPD4-217ENST00000473720 CXCL11O14625 94 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
SMPD4-217ENST00000473720 ZAP70P43403 619 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 MOGSQ13724 837 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 GPAT2Q6NUI2 795 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 ARMC5Q96C12 935 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 PARK7Q99497 189 aaKnown RBP14.65□□□□□ -0.06
SMPD4-217ENST00000473720 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-217ENST00000473720 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
SMPD4-217ENST00000473720 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 NAV1Q8NEY1 1877 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 ZBED9Q6R2W3 1325 aa14.65□□□□□ -0.06
SMPD4-217ENST00000473720 A0A0G2JLL6 359 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-217ENST00000473720 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-217ENST00000473720 CTGFP29279 349 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 PRPF38BQ5VTL8 546 aaKnown RBP14.64□□□□□ -0.07
SMPD4-217ENST00000473720 FASTKD5Q7L8L6 764 aaKnown RBP14.64□□□□□ -0.07
SMPD4-217ENST00000473720 PRRT2Q7Z6L0 340 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms