RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 TM4SF5O14894 197 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 LIG1P18858 919 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 GIPRP48546 466 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 GSK3AP49840 483 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 CLCQ05315 142 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 TNNI3KQ59H18 835 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 OR6P1Q8NGX9 317 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 ZNRF3Q9ULT6 936 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 ADAMTS8Q9UP79 889 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 PCDHB14Q9Y5E9 798 aa6.12□□□□□ -1.43
PRPF3-204ENST00000470824 LOC100289279A0A1B0GTE1 492 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 GFRA2O00451 464 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 DDX3YO15523 660 aaKnown RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 KLF4O43474 513 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 ZNF862O60290 1169 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 DEAF1O75398 565 aaPredicted RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 ATE1O95260 518 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 CTSBP07858 339 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 DGKGP49619 791 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 RAC1P63000 192 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 MLECQ14165 292 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 INPP5AQ14642 412 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 WIPI1Q5MNZ9 446 aaPredicted RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 RBBP8NLQ8NC74 664 aaPredicted RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 ELMO3Q96BJ8 720 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 PLPPR2Q96GM1 343 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 TRIM55Q9BYV6 548 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 RAD18Q9NS91 495 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 SIRPGQ9P1W8 387 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 POLR3KQ9Y2Y1 108 aaPredicted RBP6.11□□□□□ -1.43
PRPF3-204ENST00000470824 TACC3Q9Y6A5 838 aa6.11□□□□□ -1.43
PRPF3-204ENST00000470824 SMAD7O15105 426 aaKnown RBP6.1□□□□□ -1.43
PRPF3-204ENST00000470824 SMARCA5O60264 1052 aaPredicted RBP6.1□□□□□ -1.43
PRPF3-204ENST00000470824 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 ADAM11O75078 769 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 CDK8P49336 464 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 RAB33AQ14088 237 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 NFE2L2Q16236 605 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 FOXD4L6Q3SYB3 417 aaPredicted RBP6.1□□□□□ -1.43
PRPF3-204ENST00000470824 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
PRPF3-204ENST00000470824 LRFN4Q6PJG9 635 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 FOXD4L3Q6VB84 417 aaPredicted RBP6.1□□□□□ -1.43
PRPF3-204ENST00000470824 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
PRPF3-204ENST00000470824 SYNGAP1Q96PV0 1343 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 PRR36Q9H6K5 1346 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 SPDYE3A6NKU9 549 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 AOC2O75106 756 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 SELPP16109 830 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 HOXB4P17483 251 aaPredicted RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 CANXP27824 592 aaKnown RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 PDE4BQ07343 736 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 DUOXA2Q1HG44 320 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 ZC3H12AQ5D1E8 599 aaKnown RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 ZNF385CQ66K41 422 aaPredicted RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 GIMAP6Q6P9H5 292 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 FAM177A1Q8N128 213 aaPredicted RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 HNRNPLLQ8WVV9 542 aaKnown RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 MKL1Q969V6 931 aa6.09□□□□□ -1.43
PRPF3-204ENST00000470824 WDR89Q96FK6 387 aaPredicted RBP6.09□□□□□ -1.43
PRPF3-204ENST00000470824 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 DCDC2CA8MYV0 355 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 K7ELQ4 463 aaPredicted RBP6.08□□□□□ -1.44
PRPF3-204ENST00000470824 PIK3R2O00459 728 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 DLL1O00548 723 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 HTR3BO95264 441 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 DLGAP3O95886 979 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 PLCG1P19174 1290 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 SERINC3Q13530 473 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 BMS1Q14692 1282 aaKnown RBP6.08□□□□□ -1.44
PRPF3-204ENST00000470824 GPAT2Q6NUI2 795 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 CYFIP1Q7L576 1253 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 C12orf40Q86WS4 652 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 FMR1NBQ8N0W7 255 aaPredicted RBP6.08□□□□□ -1.44
PRPF3-204ENST00000470824 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 MRFAP1L1Q96HT8 127 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 WDR18Q9BV38 432 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 PIF1Q9H611 641 aa6.08□□□□□ -1.44
PRPF3-204ENST00000470824 TMA7Q9Y2S6 64 aaKnown RBP6.08□□□□□ -1.44
PRPF3-204ENST00000470824 TRIM28Q13263 835 aaKnown RBP6.07□□□□□ -1.44
PRPF3-204ENST00000470824 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
PRPF3-204ENST00000470824 UBASH3BQ8TF42 649 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 RUSC1Q9BVN2 902 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 PLVAPQ9BX97 442 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 PICK1Q9NRD5 415 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 ACTR10Q9NZ32 417 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 CDK11AQ9UQ88 783 aaPredicted RBP6.07□□□□□ -1.44
PRPF3-204ENST00000470824 CORINQ9Y5Q5 1042 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 CSADQ9Y600 493 aa6.07□□□□□ -1.44
PRPF3-204ENST00000470824 CADPSQ9ULU8 1353 aa6.06□□□□□ -1.44
PRPF3-204ENST00000470824 TLDC2A0PJX2 215 aa6.06□□□□□ -1.44
PRPF3-204ENST00000470824 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
PRPF3-204ENST00000470824 MEGF11A6BM72 1044 aa6.06□□□□□ -1.44
PRPF3-204ENST00000470824 CASP7P55210 303 aa6.06□□□□□ -1.44
PRPF3-204ENST00000470824 ETF1P62495 437 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms