RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
LINC00173-201ENST00000470091 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
LINC00173-201ENST00000470091 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
LINC00173-201ENST00000470091 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
LINC00173-201ENST00000470091 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
LINC00173-201ENST00000470091 PPIL2Q13356 520 aa16.62■□□□□ 0.25
LINC00173-201ENST00000470091 ARHGAP39Q9C0H5 1083 aa16.62■□□□□ 0.25
LINC00173-201ENST00000470091 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
LINC00173-201ENST00000470091 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
LINC00173-201ENST00000470091 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
LINC00173-201ENST00000470091 PPATQ06203 517 aa16.61■□□□□ 0.25
LINC00173-201ENST00000470091 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
LINC00173-201ENST00000470091 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
LINC00173-201ENST00000470091 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
LINC00173-201ENST00000470091 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
LINC00173-201ENST00000470091 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
LINC00173-201ENST00000470091 BRCA2P51587 3418 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 TLR2O60603 784 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 TFCP2Q12800 502 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 KIF22Q14807 665 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 ARMC5Q96C12 935 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
LINC00173-201ENST00000470091 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 SEMA3EO15041 775 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 DZIP1Q86YF9 867 aaKnown RBP16.59■□□□□ 0.25
LINC00173-201ENST00000470091 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
LINC00173-201ENST00000470091 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 CPA4Q9UI42 421 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
LINC00173-201ENST00000470091 PDHXO00330 501 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 XAGE2Q96GT9 111 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
LINC00173-201ENST00000470091 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.24
LINC00173-201ENST00000470091 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
LINC00173-201ENST00000470091 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
LINC00173-201ENST00000470091 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 OS9Q13438 667 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 OTUD7AQ8TE49 926 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
LINC00173-201ENST00000470091 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
LINC00173-201ENST00000470091 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
LINC00173-201ENST00000470091 PICALMQ13492 652 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
LINC00173-201ENST00000470091 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
LINC00173-201ENST00000470091 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 LAMB1P07942 1786 aa16.56■□□□□ 0.24
LINC00173-201ENST00000470091 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 PSMC4P43686 418 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 RHPN1Q8TCX5 695 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 IL1RAPL2Q9NP60 686 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
LINC00173-201ENST00000470091 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
LINC00173-201ENST00000470091 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 ENTPD3O75355 529 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
LINC00173-201ENST00000470091 CTGFP29279 349 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 BTDP43251 543 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 MECOMQ03112 1051 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00173-201ENST00000470091 MOGSQ13724 837 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 NOL9Q5SY16 702 aaKnown RBP16.54■□□□□ 0.24
LINC00173-201ENST00000470091 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
LINC00173-201ENST00000470091 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
LINC00173-201ENST00000470091 GAKO14976 1311 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 CYP2C8P10632 490 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 PI16Q6UXB8 463 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
LINC00173-201ENST00000470091 CXCL11O14625 94 aa16.52■□□□□ 0.24
LINC00173-201ENST00000470091 PTPRAP18433 802 aa16.52■□□□□ 0.24
LINC00173-201ENST00000470091 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.24
LINC00173-201ENST00000470091 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
LINC00173-201ENST00000470091 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
LINC00173-201ENST00000470091 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
LINC00173-201ENST00000470091 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
LINC00173-201ENST00000470091 CEP290O15078 2479 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms