RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZSWIM5Q9P217 1185 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 GLI3P10071 1580 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 VWA3AA6NCI4 1184 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 IKBKBO14920 756 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.18
VARS2-205ENST00000469358 PLA2G4AP47712 749 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 TMEM139Q8IV31 216 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 MED15Q96RN5 788 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
VARS2-205ENST00000469358 KIF2AO00139 706 aaPredicted RBP13.9□□□□□ -0.18
VARS2-205ENST00000469358 TOB1P50616 345 aaPredicted RBP13.9□□□□□ -0.18
VARS2-205ENST00000469358 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 OLFM4Q6UX06 510 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 LY9Q9HBG7 655 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 PRDM11Q9NQV5 511 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 RIPOR2Q9Y4F9 1068 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 PARP3Q9Y6F1 533 aa13.9□□□□□ -0.18
VARS2-205ENST00000469358 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 TFRCP02786 760 aaKnown RBP13.89□□□□□ -0.19
VARS2-205ENST00000469358 PDE6AP16499 860 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 GNG11P61952 73 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 OXER1Q8TDS5 423 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 CPLX3Q8WVH0 158 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
VARS2-205ENST00000469358 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
VARS2-205ENST00000469358 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
VARS2-205ENST00000469358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
VARS2-205ENST00000469358 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 TJP1Q07157 1748 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 NRDCO43847 1150 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 STX17P56962 302 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 TRIM29Q14134 588 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 TTLL11Q8NHH1 800 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
VARS2-205ENST00000469358 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
VARS2-205ENST00000469358 TEX35Q5T0J7 233 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 AIDAQ96BJ3 306 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■■■■■ 50.5
VARS2-205ENST00000469358 ATG3Q9NT62 314 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 MBD4O95243 580 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 GYS2P54840 703 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
VARS2-205ENST00000469358 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
VARS2-205ENST00000469358 IQSEC3Q9UPP2 1182 aaPredicted RBP13.88□□□□□ -0.19
VARS2-205ENST00000469358 PPP6R2O75170 966 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 SMYD4Q8IYR2 804 aaPredicted RBP13.87□□□□□ -0.19
VARS2-205ENST00000469358 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
VARS2-205ENST00000469358 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 TADA3O75528 432 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 SASH3O75995 380 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
VARS2-205ENST00000469358 MIGA1Q8NAN2 632 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 STAMQ92783 540 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
VARS2-205ENST00000469358 BAG1Q99933 345 aaPredicted RBP13.87□□□□□ -0.19
VARS2-205ENST00000469358 TEX33O43247 280 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 TC2NQ8N9U0 490 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 CHMP4CQ96CF2 233 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 TMEM94Q12767 1356 aa13.87□□□□□ -0.19
VARS2-205ENST00000469358 CSF1RP07333 972 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 AFMP43652 599 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 KRI1Q8N9T8 703 aaKnown RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 POSTNQ15063 836 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 CPLX2Q6PUV4 134 aaKnown RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 MRPL44Q9H9J2 332 aaKnown RBP13.86□□□□□ -0.19
VARS2-205ENST00000469358 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 KAT6BQ8WYB5 2073 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 SOWAHDA6NJG2 315 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 NAPBQ9H115 298 aa13.86□□□□□ -0.19
VARS2-205ENST00000469358 PHLPP2Q6ZVD8 1323 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 CBFA2T2O43439 604 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 CUTAO60888 179 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 CDKL5O76039 1030 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
VARS2-205ENST00000469358 KIF6Q6ZMV9 814 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 IFNL3Q8IZI9 196 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 NEK11Q8NG66 645 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 DHX58Q96C10 678 aa13.85□□□□□ -0.19
VARS2-205ENST00000469358 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms