RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ARID4AP29374 1257 aaPredicted RBP30.22■■■□□ 2.43
PTCH1-210ENST00000468211 RHBDL3P58872 404 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 PICALMQ13492 652 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 POLA2Q14181 598 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 GORABQ5T7V8 394 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 SLF2Q8IX21 1173 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 ARMC5Q96C12 935 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 C1orf115Q9H7X2 142 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 PTPRFP10586 1907 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 PHIPQ8WWQ0 1821 aa30.22■■■□□ 2.43
PTCH1-210ENST00000468211 DOCK1Q14185 1865 aa30.21■■■□□ 2.43
PTCH1-210ENST00000468211 MYO5AQ9Y4I1 1855 aaKnown RBP30.21■■■□□ 2.43
PTCH1-210ENST00000468211 GPR75-ASB3A0A0A6YYF3 556 aa30.21■■■□□ 2.43
PTCH1-210ENST00000468211 MCAMP43121 646 aa30.21■■■□□ 2.43
PTCH1-210ENST00000468211 PTCH2Q9Y6C5 1203 aa30.21■■■□□ 2.43
PTCH1-210ENST00000468211 BRCA2P51587 3418 aa30.21■■■□□ 2.43
PTCH1-210ENST00000468211 RLBP1P12271 317 aa30.2■■■□□ 2.43
PTCH1-210ENST00000468211 ANKRD23Q86SG2 305 aa30.2■■■□□ 2.43
PTCH1-210ENST00000468211 ZSCAN29Q8IWY8 852 aaPredicted RBP30.2■■■□□ 2.43
PTCH1-210ENST00000468211 LACTBP83111 547 aaPredicted RBP30.19■■■□□ 2.42
PTCH1-210ENST00000468211 MAP3K10Q02779 954 aa30.19■■■□□ 2.42
PTCH1-210ENST00000468211 NSUN4Q96CB9 384 aaKnown RBP30.19■■■□□ 2.42
PTCH1-210ENST00000468211 MKI67P46013 3256 aaKnown RBP30.18■■■□□ 2.42
PTCH1-210ENST00000468211 PDHXO00330 501 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 ECM2O94769 699 aaPredicted RBP30.18■■■□□ 2.42
PTCH1-210ENST00000468211 ATP8B2P98198 1209 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 DIEXFQ68CQ4 756 aaKnown RBP30.18■■■□□ 2.42
PTCH1-210ENST00000468211 C17orf99Q6UX52 265 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 SSH3Q8TE77 659 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 CPA4Q9UI42 421 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 ADGRA2Q96PE1 1338 aa30.18■■■□□ 2.42
PTCH1-210ENST00000468211 CTGFP29279 349 aa30.17■■■□□ 2.42
PTCH1-210ENST00000468211 SCYL3Q8IZE3 742 aa30.17■■■□□ 2.42
PTCH1-210ENST00000468211 GPAT2Q6NUI2 795 aa30.16■■■□□ 2.42
PTCH1-210ENST00000468211 RAI14Q9P0K7 980 aa30.16■■■□□ 2.42
PTCH1-210ENST00000468211 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.16■■■□□ 2.42
PTCH1-210ENST00000468211 ZHX2Q9Y6X8 837 aa30.16■■■□□ 2.42
PTCH1-210ENST00000468211 PTPRAP18433 802 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 ARHGEF6Q15052 776 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 TNNI3KQ59H18 835 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 ZNF333Q96JL9 665 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 DBNDD2Q9BQY9 259 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 SNRKQ9NRH2 765 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 FPGT-TNNI3KV9GXZ4 949 aa30.15■■■□□ 2.42
PTCH1-210ENST00000468211 CDK5RAP2Q96SN8 1893 aa30.14■■■□□ 2.42
PTCH1-210ENST00000468211 CXCL11O14625 94 aa30.14■■■□□ 2.42
PTCH1-210ENST00000468211 ZBTB7BO15156 539 aaPredicted RBP30.14■■■□□ 2.42
PTCH1-210ENST00000468211 UQCRFS1P1P0C7P4 283 aa30.14■■■□□ 2.42
PTCH1-210ENST00000468211 GPR108Q9NPR9 543 aa30.14■■■□□ 2.42
PTCH1-210ENST00000468211 MAST2Q6P0Q8 1798 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 FAM196BA6NMK8 535 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 SLC34A2O95436 690 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 LDHCP07864 332 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 EN2P19622 333 aaPredicted RBP30.13■■■□□ 2.41
PTCH1-210ENST00000468211 GSTO1P78417 241 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 PRPF38BQ5VTL8 546 aaKnown RBP30.13■■■□□ 2.41
PTCH1-210ENST00000468211 ITPRIPQ8IWB1 547 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 FTSJ3Q8IY81 847 aaKnown RBP30.13■■■□□ 2.41
PTCH1-210ENST00000468211 PICK1Q9NRD5 415 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 AFG3L2Q9Y4W6 797 aa30.13■■■□□ 2.41
PTCH1-210ENST00000468211 ATAD5Q96QE3 1844 aa30.12■■■□□ 2.41
PTCH1-210ENST00000468211 MGAMO43451 1857 aa30.12■■■□□ 2.41
PTCH1-210ENST00000468211 SURF6O75683 361 aaKnown RBP30.12■■■□□ 2.41
PTCH1-210ENST00000468211 OS9Q13438 667 aaPredicted RBP30.12■■■□□ 2.41
PTCH1-210ENST00000468211 KIF22Q14807 665 aa30.12■■■□□ 2.41
PTCH1-210ENST00000468211 SLC9C1Q4G0N8 1177 aa30.12■■■□□ 2.41
PTCH1-210ENST00000468211 CCDC84Q86UT8 332 aaPredicted RBP30.12■■■□□ 2.41
PTCH1-210ENST00000468211 SIPA1L1O43166 1804 aa30.11■■■□□ 2.41
PTCH1-210ENST00000468211 A0A0G2JLL6 359 aaPredicted RBP30.11■■■□□ 2.41
PTCH1-210ENST00000468211 NPM3O75607 178 aaKnown RBP30.11■■■□□ 2.41
PTCH1-210ENST00000468211 CYP2C8P10632 490 aa30.11■■■□□ 2.41
PTCH1-210ENST00000468211 PRRT2Q7Z6L0 340 aaPredicted RBP30.11■■■□□ 2.41
PTCH1-210ENST00000468211 LRP2BPQ9P2M1 347 aa30.11■■■□□ 2.41
PTCH1-210ENST00000468211 CTNND1O60716 968 aaKnown RBP30.1■■■□□ 2.41
PTCH1-210ENST00000468211 TTC39AQ5SRH9 613 aa30.1■■■□□ 2.41
PTCH1-210ENST00000468211 SH3TC2Q8TF17 1288 aa30.1■■■□□ 2.41
PTCH1-210ENST00000468211 TRIM47Q96LD4 638 aa30.1■■■□□ 2.41
PTCH1-210ENST00000468211 NOP58Q9Y2X3 529 aaKnown RBP30.1■■■□□ 2.41
PTCH1-210ENST00000468211 COL2A1P02458 1487 aaPredicted RBP30.08■■■□□ 2.41
PTCH1-210ENST00000468211 TBC1D12O60347 775 aa30.08■■■□□ 2.41
PTCH1-210ENST00000468211 MYCP01106 439 aaPredicted RBP30.08■■■□□ 2.41
PTCH1-210ENST00000468211 PSMC4P43686 418 aa30.08■■■□□ 2.41
PTCH1-210ENST00000468211 SH3RF3Q8TEJ3 882 aaPredicted RBP30.08■■■□□ 2.41
PTCH1-210ENST00000468211 OSBPL5Q9H0X9 879 aaPredicted RBP30.08■■■□□ 2.41
PTCH1-210ENST00000468211 TLR7Q9NYK1 1049 aaKnown RBP30.08■■■□□ 2.41
PTCH1-210ENST00000468211 FOCADQ5VW36 1801 aa30.08■■■□□ 2.41
PTCH1-210ENST00000468211 MAP4K4O95819 1239 aaPredicted RBP30.07■■■□□ 2.4
PTCH1-210ENST00000468211 CYP2E1P05181 493 aaPredicted RBP30.07■■■□□ 2.4
PTCH1-210ENST00000468211 RRP1BQ14684 758 aaKnown RBP30.07■■■□□ 2.4
PTCH1-210ENST00000468211 CCDC158Q5M9N0 1113 aa30.07■■■□□ 2.4
PTCH1-210ENST00000468211 GADL1Q6ZQY3 521 aa30.07■■■□□ 2.4
PTCH1-210ENST00000468211 ADGRA1Q86SQ6 560 aa30.07■■■□□ 2.4
PTCH1-210ENST00000468211 NBPF11Q86T75 865 aa30.07■■■□□ 2.4
PTCH1-210ENST00000468211 TEX11Q8IYF3 940 aa30.07■■■□□ 2.4
PTCH1-210ENST00000468211 ZBED9Q6R2W3 1325 aa30.06■■■□□ 2.4
PTCH1-210ENST00000468211 GNRH1P01148 92 aa30.06■■■□□ 2.4
PTCH1-210ENST00000468211 BCRP11274 1271 aa30.06■■■□□ 2.4
PTCH1-210ENST00000468211 FASTKD5Q7L8L6 764 aaKnown RBP30.06■■■□□ 2.4
PTCH1-210ENST00000468211 PARK7Q99497 189 aaKnown RBP30.06■■■□□ 2.4
PTCH1-210ENST00000468211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms