RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
APP-213ENST00000464867 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
APP-213ENST00000464867 PAWRQ96IZ0 340 aaKnown RBP12.19□□□□□ -0.46
APP-213ENST00000464867 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
APP-213ENST00000464867 BTBD19C9JJ37 291 aa12.18□□□□□ -0.46
APP-213ENST00000464867 PLA2G5P39877 138 aa12.18□□□□□ -0.46
APP-213ENST00000464867 FCGRTP55899 365 aa12.18□□□□□ -0.46
APP-213ENST00000464867 VGLL4Q14135 290 aa12.18□□□□□ -0.46
APP-213ENST00000464867 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
APP-213ENST00000464867 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
APP-213ENST00000464867 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
APP-213ENST00000464867 FAM109BQ6ICB4 259 aaPredicted RBP12.18□□□□□ -0.46
APP-213ENST00000464867 C17orf99Q6UX52 265 aa12.18□□□□□ -0.46
APP-213ENST00000464867 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.18□□□□□ -0.46
APP-213ENST00000464867 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
APP-213ENST00000464867 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
APP-213ENST00000464867 BABAM1Q9NWV8 329 aa12.18□□□□□ -0.46
APP-213ENST00000464867 CPA4Q9UI42 421 aa12.18□□□□□ -0.46
APP-213ENST00000464867 MINPP1Q9UNW1 487 aa12.18□□□□□ -0.46
APP-213ENST00000464867 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
APP-213ENST00000464867 FAM205AQ6ZU69 1335 aa12.17□□□□□ -0.46
APP-213ENST00000464867 SPTBN5Q9NRC6 3674 aaKnown RBP12.17□□□□□ -0.46
APP-213ENST00000464867 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
APP-213ENST00000464867 RGS20O76081 388 aa12.17□□□□□ -0.46
APP-213ENST00000464867 MAGEA10P43363 369 aaPredicted RBP12.17□□□□□ -0.46
APP-213ENST00000464867 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
APP-213ENST00000464867 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
APP-213ENST00000464867 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
APP-213ENST00000464867 ADGRG1Q9Y653 693 aa12.17□□□□□ -0.46
APP-213ENST00000464867 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
APP-213ENST00000464867 SPDYE5A6NIY4 337 aa12.16□□□□□ -0.46
APP-213ENST00000464867 ADCY3O60266 1144 aa12.16□□□□□ -0.46
APP-213ENST00000464867 SYN1P17600 705 aa12.16□□□□□ -0.46
APP-213ENST00000464867 KCNJ4P48050 445 aa12.16□□□□□ -0.46
APP-213ENST00000464867 TNNI2P48788 182 aa12.16□□□□□ -0.46
APP-213ENST00000464867 PRKCZQ05513 592 aa12.16□□□□□ -0.46
APP-213ENST00000464867 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
APP-213ENST00000464867 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
APP-213ENST00000464867 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
APP-213ENST00000464867 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
APP-213ENST00000464867 DBF4Q9UBU7 674 aaPredicted RBP12.16□□□□□ -0.46
APP-213ENST00000464867 CTGFP29279 349 aa12.15□□□□□ -0.46
APP-213ENST00000464867 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
APP-213ENST00000464867 TXNRD3Q86VQ6 643 aa12.15□□□□□ -0.46
APP-213ENST00000464867 MAFAQ8NHW3 353 aaPredicted RBP12.15□□□□□ -0.46
APP-213ENST00000464867 ANKRD2Q9GZV1 360 aa12.15□□□□□ -0.46
APP-213ENST00000464867 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
APP-213ENST00000464867 SPEF2Q9C093 1822 aa12.15□□□□□ -0.46
APP-213ENST00000464867 MGAMO43451 1857 aa12.14□□□□□ -0.47
APP-213ENST00000464867 ADGRA2Q96PE1 1338 aa12.14□□□□□ -0.47
APP-213ENST00000464867 TNFRSF10AO00220 468 aa12.14□□□□□ -0.47
APP-213ENST00000464867 INHAP05111 366 aa12.14□□□□□ -0.47
APP-213ENST00000464867 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
APP-213ENST00000464867 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
APP-213ENST00000464867 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
APP-213ENST00000464867 CCDC191Q8NCU4 936 aa12.14□□□□□ -0.47
APP-213ENST00000464867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.14□□□□□ -0.477e-14■■□□□ 11.8
APP-213ENST00000464867 MTRQ99707 1265 aa12.14□□□□□ -0.47
APP-213ENST00000464867 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
APP-213ENST00000464867 PDHXO00330 501 aa12.13□□□□□ -0.47
APP-213ENST00000464867 IRF6O14896 467 aa12.13□□□□□ -0.47
APP-213ENST00000464867 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
APP-213ENST00000464867 PPIL2Q13356 520 aa12.13□□□□□ -0.47
APP-213ENST00000464867 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
APP-213ENST00000464867 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
APP-213ENST00000464867 HOOK2Q96ED9 719 aa12.13□□□□□ -0.47
APP-213ENST00000464867 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
APP-213ENST00000464867 ELNP15502 786 aa12.12□□□□□ -0.47
APP-213ENST00000464867 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
APP-213ENST00000464867 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
APP-213ENST00000464867 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
APP-213ENST00000464867 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
APP-213ENST00000464867 ZNF70Q9UC06 446 aaPredicted RBP12.12□□□□□ -0.47
APP-213ENST00000464867 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
APP-213ENST00000464867 PPP2R1AP30153 589 aa12.11□□□□□ -0.47
APP-213ENST00000464867 FLT3LGP49771 235 aa12.11□□□□□ -0.47
APP-213ENST00000464867 CTSWP56202 376 aa12.11□□□□□ -0.47
APP-213ENST00000464867 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
APP-213ENST00000464867 DIS3LQ8TF46 1054 aaKnown RBP12.11□□□□□ -0.47
APP-213ENST00000464867 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
APP-213ENST00000464867 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
APP-213ENST00000464867 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
APP-213ENST00000464867 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
APP-213ENST00000464867 MPHOSPH8Q99549 860 aa12.11□□□□□ -0.47
APP-213ENST00000464867 CDX2Q99626 313 aaPredicted RBP12.11□□□□□ -0.47
APP-213ENST00000464867 MYD88Q99836 296 aa12.11□□□□□ -0.47
APP-213ENST00000464867 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
APP-213ENST00000464867 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
APP-213ENST00000464867 GABRQQ9UN88 632 aa12.11□□□□□ -0.47
APP-213ENST00000464867 MYH3P11055 1940 aa12.1□□□□□ -0.47
APP-213ENST00000464867 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
APP-213ENST00000464867 PPATQ06203 517 aa12.1□□□□□ -0.47
APP-213ENST00000464867 LMOD3Q0VAK6 560 aa12.1□□□□□ -0.47
APP-213ENST00000464867 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
APP-213ENST00000464867 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
APP-213ENST00000464867 PLEKHF1Q96S99 279 aa12.1□□□□□ -0.47
APP-213ENST00000464867 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
APP-213ENST00000464867 TDRD3Q9H7E2 651 aaKnown RBP12.1□□□□□ -0.47
APP-213ENST00000464867 SNCAIPQ9Y6H5 919 aa12.1□□□□□ -0.47
APP-213ENST00000464867 EYSQ5T1H1 3165 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms