RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 TFCP2Q12800 502 aa12.2□□□□□ -0.46
SYN3-205ENST00000459990 MTX1Q13505 466 aa12.2□□□□□ -0.46
SYN3-205ENST00000459990 MTFR1Q15390 333 aa12.2□□□□□ -0.46
SYN3-205ENST00000459990 CCDC84Q86UT8 332 aaPredicted RBP12.2□□□□□ -0.46
SYN3-205ENST00000459990 IDI2Q9BXS1 227 aa12.2□□□□□ -0.46
SYN3-205ENST00000459990 PLXNB2O15031 1838 aa12.2□□□□□ -0.46
SYN3-205ENST00000459990 MROH7-TTC4A0A0A0MT08 1334 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 CYP2C8P10632 490 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 OSBPP22059 807 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 BTDP43251 543 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 RHBDL3P58872 404 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 XAGE2Q96GT9 111 aa12.19□□□□□ -0.46
SYN3-205ENST00000459990 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 ENTPD3O75355 529 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 BCRP11274 1271 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 TRIM27P14373 513 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 PTPRAP18433 802 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 PSMC4P43686 418 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 PICALMQ13492 652 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 HABP4Q5JVS0 413 aaKnown RBP12.18□□□□□ -0.46
SYN3-205ENST00000459990 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SYN3-205ENST00000459990 SCYL3Q8IZE3 742 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
SYN3-205ENST00000459990 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
SYN3-205ENST00000459990 COL2A1P02458 1487 aaPredicted RBP12.17□□□□□ -0.46
SYN3-205ENST00000459990 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
SYN3-205ENST00000459990 MECOMQ03112 1051 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 PRKCZQ05513 592 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
SYN3-205ENST00000459990 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
SYN3-205ENST00000459990 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 SRRDQ9UH36 339 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 GABRQQ9UN88 632 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 AFG3L2Q9Y4W6 797 aa12.17□□□□□ -0.46
SYN3-205ENST00000459990 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
SYN3-205ENST00000459990 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 CXCL11O14625 94 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 BCAR3O75815 825 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 MCAMP43121 646 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
SYN3-205ENST00000459990 KIF22Q14807 665 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
SYN3-205ENST00000459990 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
SYN3-205ENST00000459990 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 GNRH1P01148 92 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 GNAI3P08754 354 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
SYN3-205ENST00000459990 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 UBE2Q1Q7Z7E8 422 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
SYN3-205ENST00000459990 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
SYN3-205ENST00000459990 TRIOBPQ9H2D6 2365 aa12.15□□□□□ -0.46
SYN3-205ENST00000459990 MYH1P12882 1939 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 TRIM75PA6NK02 468 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
SYN3-205ENST00000459990 GRK4P32298 578 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 FXR1P51114 621 aaKnown RBP eCLIP12.14□□□□□ -0.47
SYN3-205ENST00000459990 PRMT2P55345 433 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
SYN3-205ENST00000459990 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
SYN3-205ENST00000459990 SPATA5Q8NB90 893 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 GCC1Q96CN9 775 aa12.14□□□□□ -0.47
SYN3-205ENST00000459990 SHROOM1Q2M3G4 852 aaPredicted RBP12.13□□□□□ -0.47
SYN3-205ENST00000459990 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 RAET1EQ8TD07 263 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
SYN3-205ENST00000459990 PICK1Q9NRD5 415 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
SYN3-205ENST00000459990 AKAP2Q9Y2D5 859 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 FRMPD3Q5JV73 1810 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
SYN3-205ENST00000459990 H0YGN5 161 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
SYN3-205ENST00000459990 CCL5P13501 91 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 FCGRTP55899 365 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
SYN3-205ENST00000459990 DNAJC18Q9H819 358 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 NAV1Q8NEY1 1877 aa12.12□□□□□ -0.47
SYN3-205ENST00000459990 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
SYN3-205ENST00000459990 GNAI2P04899 355 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 ELNP15502 786 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms