RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 PICK1Q9NRD5 415 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 SRRDQ9UH36 339 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 HTTP42858 3142 aa9.98□□□□□ -0.81
NIF3L1-209ENST00000454952 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 ENTPD3O75355 529 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 INPP5BP32019 993 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 IL15P40933 162 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 PSMC4P43686 418 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 RFX5P48382 616 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 FCGRTP55899 365 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 UBXN2AP68543 259 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 CAP1Q01518 475 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 TCP10Q12799 353 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 SPTY2D1Q68D10 685 aaPredicted RBP9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 SMC4Q9NTJ3 1288 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 MGAMO43451 1857 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 CEP290O15078 2479 aa9.97□□□□□ -0.81
NIF3L1-209ENST00000454952 GRK4P32298 578 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 SLFN5Q08AF3 891 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 IDI2Q9BXS1 227 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 ARHGAP39Q9C0H5 1083 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 CPA4Q9UI42 421 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 PDS5AQ29RF7 1337 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 MYPNQ86TC9 1320 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 ZSWIM8A7E2V4 1837 aa9.96□□□□□ -0.82
NIF3L1-209ENST00000454952 MAP4K4O95819 1239 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 GJB1P08034 283 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 OSBPP22059 807 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 PRDX5P30044 214 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 NFIAQ12857 509 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 SCYL3Q8IZE3 742 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 SIL1Q9H173 461 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 BIN2Q9UBW5 565 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 AKAP2Q9Y2D5 859 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 ADGRA2Q96PE1 1338 aa9.95□□□□□ -0.82
NIF3L1-209ENST00000454952 PTPRFP10586 1907 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 DOCK1Q14185 1865 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 GAKO14976 1311 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 CTNND1O60716 968 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 MYCP01106 439 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 GJA8P48165 433 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 RGS3P49796 1198 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 FXR1P51114 621 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 PRRT2Q7Z6L0 340 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 DPF3Q92784 378 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 COPRSQ9NQ92 184 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 CENPFP49454 3210 aa9.94□□□□□ -0.82
NIF3L1-209ENST00000454952 PHF20L1A8MW92 1017 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 H0YGN5 161 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 BCRP11274 1271 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 CCL5P13501 91 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 PTPRAP18433 802 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 PHKA1P46020 1223 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 GSTO1P78417 241 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 MAP3K10Q02779 954 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 MOGSQ13724 837 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 SMCR8Q8TEV9 937 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 RNF208Q9H0X6 261 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 ABCF2Q9UG63 623 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 NR2E3Q9Y5X4 410 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 ZHX2Q9Y6X8 837 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 TRIOBPQ9H2D6 2365 aa9.93□□□□□ -0.82
NIF3L1-209ENST00000454952 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 RFX7Q2KHR2 1363 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 ATRNL1Q5VV63 1379 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 TBC1D12O60347 775 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 LDHCP07864 332 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 GNAI3P08754 354 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 PRKCZQ05513 592 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 GPAT2Q6NUI2 795 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 ERICH6Q7L0X2 663 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 NOB1Q9ULX3 412 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 AFG3L2Q9Y4W6 797 aa9.92□□□□□ -0.82
NIF3L1-209ENST00000454952 PHIPQ8WWQ0 1821 aa9.91□□□□□ -0.82
NIF3L1-209ENST00000454952 MROH7-TTC4A0A0A0MT08 1334 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 390 ms