RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 C17orf99Q6UX52 265 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 ANKRD23Q86SG2 305 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
LINC01238-204ENST00000451070 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
LINC01238-204ENST00000451070 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
LINC01238-204ENST00000451070 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-204ENST00000451070 IPO8O15397 1037 aaKnown RBP12.24□□□□□ -0.45
LINC01238-204ENST00000451070 GNAI2P04899 355 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 EN2P19622 333 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-204ENST00000451070 CTGFP29279 349 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
LINC01238-204ENST00000451070 ARHGEF6Q15052 776 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 PI16Q6UXB8 463 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
LINC01238-204ENST00000451070 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
LINC01238-204ENST00000451070 PDHXO00330 501 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 BTDP43251 543 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 RHBDL3P58872 404 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 MECOMQ03112 1051 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
LINC01238-204ENST00000451070 GPAT2Q6NUI2 795 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 NEUROD6Q96NK8 337 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 CPA4Q9UI42 421 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 MGAMO43451 1857 aa12.23□□□□□ -0.45
LINC01238-204ENST00000451070 GPR75-ASB3A0A0A6YYF3 556 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 CXCL11O14625 94 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 PTPRAP18433 802 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
LINC01238-204ENST00000451070 KIF22Q14807 665 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 NBPF11Q86T75 865 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
LINC01238-204ENST00000451070 MYO5AQ9Y4I1 1855 aaKnown RBP12.22□□□□□ -0.45
LINC01238-204ENST00000451070 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 GNRH1P01148 92 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 MCAMP43121 646 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 G3BP1Q13283 466 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 PICALMQ13492 652 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.45
LINC01238-204ENST00000451070 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
LINC01238-204ENST00000451070 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.46
LINC01238-204ENST00000451070 ATAD5Q96QE3 1844 aa12.21□□□□□ -0.46
LINC01238-204ENST00000451070 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
LINC01238-204ENST00000451070 CYP2C8P10632 490 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 BCRP11274 1271 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 PSMC4P43686 418 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 PRMT2P55345 433 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 POLA2Q14181 598 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 GORABQ5T7V8 394 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 PARK7Q99497 189 aaKnown RBP12.2□□□□□ -0.46
LINC01238-204ENST00000451070 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 SIPA1L1O43166 1804 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 MAST2Q6P0Q8 1798 aa12.2□□□□□ -0.46
LINC01238-204ENST00000451070 TBC1D12O60347 775 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 MYCP01106 439 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-204ENST00000451070 OSBPP22059 807 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 SLC4A8Q2Y0W8 1093 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 CCDC84Q86UT8 332 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-204ENST00000451070 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
LINC01238-204ENST00000451070 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
LINC01238-204ENST00000451070 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-204ENST00000451070 LDHCP07864 332 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 GSTO1P78417 241 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 MTFR1Q15390 333 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 FASTKD5Q7L8L6 764 aaKnown RBP12.18□□□□□ -0.46
LINC01238-204ENST00000451070 DBNDD2Q9BQY9 259 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 C1orf115Q9H7X2 142 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 FOCADQ5VW36 1801 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
LINC01238-204ENST00000451070 CEP290O15078 2479 aa12.17□□□□□ -0.46
LINC01238-204ENST00000451070 MYPNQ86TC9 1320 aa12.17□□□□□ -0.46
LINC01238-204ENST00000451070 TRIM75PA6NK02 468 aa12.17□□□□□ -0.46
LINC01238-204ENST00000451070 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
LINC01238-204ENST00000451070 RLBP1P12271 317 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms