RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 APPBP2Q92624 585 aa15.15■□□□□ 0.02
SLC48A1-201ENST00000442218 STAMQ92783 540 aa15.15■□□□□ 0.02
SLC48A1-201ENST00000442218 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
SLC48A1-201ENST00000442218 DDX41Q9UJV9 622 aaKnown RBP15.15■□□□□ 0.02
SLC48A1-201ENST00000442218 RANBP6O60518 1105 aaKnown RBP15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 NLRP12P59046 1061 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 NR5A1Q13285 461 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 ARHGAP29Q52LW3 1261 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 USP49Q70CQ1 688 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 SLC51AQ86UW1 340 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 ARMT1Q9H993 441 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 SLIT2O94813 1529 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 STX17P56962 302 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 HSD3B7Q9H2F3 369 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 PCDHA5Q9Y5H7 936 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 IRX2Q9BZI1 471 aaPredicted RBP15.14■□□□□ 0.01
SLC48A1-201ENST00000442218 A0A0U1RQJ8 604 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 APOA5Q6Q788 366 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 ATRIPQ8WXE1 791 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 POLR3EQ9NVU0 708 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 THRAP3Q9Y2W1 955 aaKnown RBP15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 CAVIN2O95810 425 aa15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 METTL16Q86W50 562 aaKnown RBP15.13■□□□□ 0.01
SLC48A1-201ENST00000442218 IFIT3O14879 490 aaKnown RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 CDK11BP21127 795 aaKnown RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 BMP6P22004 513 aa15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 AIDAQ96BJ3 306 aa15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 CARD6Q9BX69 1037 aa15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 TFRCP02786 760 aaKnown RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 MAGEB6Q8N7X4 407 aa15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
SLC48A1-201ENST00000442218 ZBTB43O43298 467 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 RIPOR2Q9Y4F9 1068 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 A0A1W2PQ27 194 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 A0A1W2PQ64 194 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 A0A1W2PQD8 194 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 POLR2DO15514 142 aaKnown RBP15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 MBD4O95243 580 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 YEATS4O95619 227 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 AFMP43652 599 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 MTF1Q14872 753 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 SLC39A14Q15043 492 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 ZSWIM5Q9P217 1185 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 CMA1P23946 247 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 GSDMDP57764 484 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 TPM4P67936 248 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 EVX2Q03828 476 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 FMR1Q06787 632 aaKnown RBP eCLIP15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 CCDC102BQ68D86 513 aa15.11■□□□□ 0.01
SLC48A1-201ENST00000442218 NEMFO60524 1076 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 PRDM1O75626 825 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 STARD3NLO95772 234 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 BCAMP50895 628 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 CLCN6P51797 869 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 TRIM29Q14134 588 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 BICDL1Q6ZP65 573 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 FEZ1Q99689 392 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 KCNH3Q9ULD8 1083 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 MINDY4BA8MYZ0 360 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 CYP19A1P11511 503 aaPredicted RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 PDE6AP16499 860 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 AKAP2Q9Y2D5 859 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
SLC48A1-201ENST00000442218 ADD2P35612 726 aa15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 GYS2P54840 703 aa15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 CTSWP56202 376 aa15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 TOGARAM2Q6ZUX3 1019 aa15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 KRT222Q8N1A0 295 aa15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 ZFP91Q96JP5 570 aaPredicted RBP15.09■□□□□ 0.01
SLC48A1-201ENST00000442218 WDR24Q96S15 920 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms