RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PPP2R3AQ06190 1150 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 ASIC2Q16515 512 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 ZCRB1Q8TBF4 217 aaKnown RBP7.44□□□□□ -1.22
USP46-201ENST00000441222 PPP4R1Q8TF05 950 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 HAUS1Q96CS2 278 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 AMOTL2Q9Y2J4 779 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 CD2APQ9Y5K6 639 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 DNMBPQ6XZF7 1577 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.44□□□□□ -1.22
USP46-201ENST00000441222 WDR46O15213 610 aaKnown RBP7.44□□□□□ -1.22
USP46-201ENST00000441222 FLOT1O75955 427 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 ARHGAP4P98171 946 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 KSR2Q6VAB6 950 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 ANKRD44Q8N8A2 993 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 IWS1Q96ST2 819 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 PPANQ9NQ55 473 aaKnown RBP7.44□□□□□ -1.22
USP46-201ENST00000441222 MCM9Q9NXL9 1143 aa7.44□□□□□ -1.22
USP46-201ENST00000441222 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 CC2D2AQ9P2K1 1620 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 DNAJC8O75937 253 aaPredicted RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 GABPAQ06546 454 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PLCB4Q15147 1175 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 WAPLQ7Z5K2 1190 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 RIOK1Q9BRS2 568 aaKnown RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 LARP6Q9BRS8 491 aaKnown RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 PICK1Q9NRD5 415 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 RPS6KA2Q15349 733 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PRR16Q569H4 304 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PPP1R21Q6ZMI0 780 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 NECAB1Q8N987 351 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 TMEM87BQ96K49 555 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 Q9H521 79 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 ZNF219Q9P2Y4 722 aaPredicted RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 MAST3O60307 1309 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 GNA14O95837 355 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 RHOXF2BP0C7M4 288 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 INPP5BP32019 993 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 DNM1Q05193 864 aaKnown RBP7.43□□□□□ -1.22
USP46-201ENST00000441222 HHATQ5VTY9 493 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 CCDC170Q8IYT3 715 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 NACA2Q9H009 215 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 CLEC11AQ9Y240 323 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PAK2Q13177 524 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 RTEL1Q9NZ71 1219 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 DENND2CQ68D51 928 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 USHBP1Q8N6Y0 703 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 MIS12Q9H081 205 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 PHBP35232 272 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 ZNF131P52739 623 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 CFAP221Q4G0U5 840 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 ANKRD20A3Q5VUR7 823 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 RUFY3Q7L099 469 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 VSIG1Q86XK7 387 aa7.43□□□□□ -1.22
USP46-201ENST00000441222 DNM2P50570 870 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 NME9Q86XW9 330 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 CARD10Q9BWT7 1032 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 POLD1P28340 1107 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 ATP6V1AP38606 617 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 EVCP57679 992 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 HELLSQ9NRZ9 838 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 AK9Q5TCS8 1911 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 CD109Q6YHK3 1445 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 GOLGA8CPA6NN73 597 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 RNF113AO15541 343 aaKnown RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 DEXIO95424 95 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 KRT3P12035 628 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 DCUN1D2Q6PH85 259 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 SPATS2Q86XZ4 545 aaKnown RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 TMTC1Q8IUR5 882 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 RBSNQ9H1K0 784 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 ZRANB1Q9UGI0 708 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 DENND2AQ9ULE3 1009 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 ABCC5O15440 1437 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 PICALMQ13492 652 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 KARSQ15046 597 aaKnown RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 MAGEB6Q8N7X4 407 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 MLKLQ8NB16 471 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 RTCBQ9Y3I0 505 aaKnown RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 ADGRL1O94910 1474 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 ARHGEF35A5YM69 484 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 RAPGEF3O95398 923 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 NIP7Q9Y221 180 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP46-201ENST00000441222 TROVE2P10155 538 aaKnown RBP eCLIP7.42□□□□□ -1.22
USP46-201ENST00000441222 AKAP4Q5JQC9 854 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 ZFP91Q96JP5 570 aaPredicted RBP7.42□□□□□ -1.22
USP46-201ENST00000441222 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
USP46-201ENST00000441222 LPXNO60711 386 aa7.41□□□□□ -1.22
USP46-201ENST00000441222 KRT9P35527 623 aa7.41□□□□□ -1.22
USP46-201ENST00000441222 IGSF22Q8N9C0 903 aa7.41□□□□□ -1.22
USP46-201ENST00000441222 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms