RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 RFX7Q2KHR2 1363 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 TLR2O60603 784 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 CAP1Q01518 475 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 ZFPM1Q8IX07 1006 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 EXOC6BQ9Y2D4 811 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 CENPFP49454 3210 aa19.74■□□□□ 0.75
ITGB1-207ENST00000439974 BTDP43251 543 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 GORABQ5T7V8 394 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 KCNH4Q9UQ05 1017 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 KIAA0100Q14667 2235 aaKnown RBP19.73■□□□□ 0.75
ITGB1-207ENST00000439974 MROH7-TTC4A0A0A0MT08 1334 aa19.73■□□□□ 0.75
ITGB1-207ENST00000439974 ATRNL1Q5VV63 1379 aa19.72■□□□□ 0.75
ITGB1-207ENST00000439974 APBB1O00213 710 aa19.72■□□□□ 0.75
ITGB1-207ENST00000439974 ZSCAN29Q8IWY8 852 aaPredicted RBP19.72■□□□□ 0.75
ITGB1-207ENST00000439974 ARMC5Q96C12 935 aa19.72■□□□□ 0.75
ITGB1-207ENST00000439974 HMG20BQ9P0W2 317 aa19.72■□□□□ 0.75
ITGB1-207ENST00000439974 SUPT16HQ9Y5B9 1047 aaKnown RBP19.72■□□□□ 0.75
ITGB1-207ENST00000439974 MECOMQ03112 1051 aa19.71■□□□□ 0.75
ITGB1-207ENST00000439974 ANKRD23Q86SG2 305 aa19.71■□□□□ 0.75
ITGB1-207ENST00000439974 SPATA5Q8NB90 893 aa19.71■□□□□ 0.75
ITGB1-207ENST00000439974 GPR75-ASB3A0A0A6YYF3 556 aa19.7■□□□□ 0.74
ITGB1-207ENST00000439974 ARID4AP29374 1257 aaPredicted RBP19.7■□□□□ 0.74
ITGB1-207ENST00000439974 KIF22Q14807 665 aa19.7■□□□□ 0.74
ITGB1-207ENST00000439974 SH3BP5LQ7L8J4 393 aa19.7■□□□□ 0.74
ITGB1-207ENST00000439974 DDX4Q9NQI0 724 aaKnown RBP19.7■□□□□ 0.74
ITGB1-207ENST00000439974 PHF20L1A8MW92 1017 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 CXCL11O14625 94 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 UQCRFS1P1P0C7P4 283 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 GSTO1P78417 241 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 LACTBP83111 547 aaPredicted RBP19.69■□□□□ 0.74
ITGB1-207ENST00000439974 PICALMQ13492 652 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 PRPF38BQ5VTL8 546 aaKnown RBP19.69■□□□□ 0.74
ITGB1-207ENST00000439974 PI16Q6UXB8 463 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 RPAP2Q8IXW5 612 aaPredicted RBP19.69■□□□□ 0.74
ITGB1-207ENST00000439974 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 ZNF384Q8TF68 577 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 NOP58Q9Y2X3 529 aaKnown RBP19.69■□□□□ 0.74
ITGB1-207ENST00000439974 PTCH2Q9Y6C5 1203 aa19.69■□□□□ 0.74
ITGB1-207ENST00000439974 RBBP6Q7Z6E9 1792 aaKnown RBP19.69■□□□□ 0.74
ITGB1-207ENST00000439974 POTEFA5A3E0 1075 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 DDTLA6NHG4 134 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-207ENST00000439974 PDHXO00330 501 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 LDHCP07864 332 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 RHBDL3P58872 404 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 MAP3K10Q02779 954 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 MOGSQ13724 837 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 C17orf99Q6UX52 265 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 NSUN4Q96CB9 384 aaKnown RBP19.68■□□□□ 0.74
ITGB1-207ENST00000439974 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
ITGB1-207ENST00000439974 GPR108Q9NPR9 543 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 PICK1Q9NRD5 415 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 BRCA2P51587 3418 aa19.68■□□□□ 0.74
ITGB1-207ENST00000439974 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
ITGB1-207ENST00000439974 SLC34A2O95436 690 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 MAP4K4O95819 1239 aaPredicted RBP19.67■□□□□ 0.74
ITGB1-207ENST00000439974 GNRH1P01148 92 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 MCAMP43121 646 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 IRX6P78412 446 aaPredicted RBP19.67■□□□□ 0.74
ITGB1-207ENST00000439974 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 TBC1D9Q6ZT07 1266 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 NBPF11Q86T75 865 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 ZNF333Q96JL9 665 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 ARHGAP39Q9C0H5 1083 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 RAI14Q9P0K7 980 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 ZSWIM8A7E2V4 1837 aa19.67■□□□□ 0.74
ITGB1-207ENST00000439974 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 DBNDD2Q9BQY9 259 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 CCDC8Q9H0W5 538 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-207ENST00000439974 IL1RAPL2Q9NP60 686 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 TLR7Q9NYK1 1049 aaKnown RBP19.66■□□□□ 0.74
ITGB1-207ENST00000439974 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 ZHX2Q9Y6X8 837 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 DOCK1Q14185 1865 aa19.66■□□□□ 0.74
ITGB1-207ENST00000439974 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
ITGB1-207ENST00000439974 HMMRO75330 724 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 PTPRAP18433 802 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 PRMT2P55345 433 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 PARK7Q99497 189 aaKnown RBP19.65■□□□□ 0.74
ITGB1-207ENST00000439974 TMEM106CQ9BVX2 250 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 LRP2BPQ9P2M1 347 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 ADGRA2Q96PE1 1338 aa19.65■□□□□ 0.74
ITGB1-207ENST00000439974 A0A0G2JLL6 359 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-207ENST00000439974 TBC1D12O60347 775 aa19.64■□□□□ 0.73
ITGB1-207ENST00000439974 CTNND1O60716 968 aaKnown RBP19.64■□□□□ 0.73
ITGB1-207ENST00000439974 CCDC158Q5M9N0 1113 aa19.64■□□□□ 0.73
ITGB1-207ENST00000439974 TTC39AQ5SRH9 613 aa19.64■□□□□ 0.73
ITGB1-207ENST00000439974 GPAT2Q6NUI2 795 aa19.64■□□□□ 0.73
ITGB1-207ENST00000439974 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
ITGB1-207ENST00000439974 PRRT2Q7Z6L0 340 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-207ENST00000439974 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-207ENST00000439974 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
ITGB1-207ENST00000439974 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
ITGB1-207ENST00000439974 RHPN1Q8TCX5 695 aa19.63■□□□□ 0.73
ITGB1-207ENST00000439974 EAF2Q96CJ1 260 aaPredicted RBP19.63■□□□□ 0.73
ITGB1-207ENST00000439974 AFG3L2Q9Y4W6 797 aa19.63■□□□□ 0.73
ITGB1-207ENST00000439974 PTPRFP10586 1907 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms