RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 MAGEB6Q8N7X4 407 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 HAUS7Q99871 368 aa16.18■□□□□ 0.18
LINC00399-201ENST00000439008 INPP5BP32019 993 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 VGLL4Q14135 290 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
LINC00399-201ENST00000439008 MIGA1Q8NAN2 632 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 ZKSCAN4Q969J2 545 aaPredicted RBP16.17■□□□□ 0.18
LINC00399-201ENST00000439008 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 ELP3Q9H9T3 547 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 SNCAIPQ9Y6H5 919 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 SALL3Q9BXA9 1300 aa16.17■□□□□ 0.18
LINC00399-201ENST00000439008 MYH7P12883 1935 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 PDE6AP16499 860 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 MAP3K9P80192 1104 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 TEX11Q8IYF3 940 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 ZNF112Q9UJU3 913 aa16.16■□□□□ 0.18
LINC00399-201ENST00000439008 PHF20L1A8MW92 1017 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
LINC00399-201ENST00000439008 LBX1P52954 281 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 MAP3K10Q02779 954 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 WRNIP1Q96S55 665 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 RIOK1Q9BRS2 568 aaKnown RBP16.15■□□□□ 0.18
LINC00399-201ENST00000439008 ECHDC1Q9NTX5 307 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 CASP8AP2Q9UKL3 1982 aa16.15■□□□□ 0.18
LINC00399-201ENST00000439008 FAM196BA6NMK8 535 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 MAP3K12Q12852 859 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 PI4K2BQ8TCG2 481 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
LINC00399-201ENST00000439008 RNF186Q9NXI6 227 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
LINC00399-201ENST00000439008 UNCXA6NJT0 531 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 MAP4K4O95819 1239 aaPredicted RBP16.13■□□□□ 0.17
LINC00399-201ENST00000439008 TM4SF4P48230 202 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
LINC00399-201ENST00000439008 RRP1BQ14684 758 aaKnown RBP16.13■□□□□ 0.17
LINC00399-201ENST00000439008 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
LINC00399-201ENST00000439008 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 AIDAQ96BJ3 306 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 MS4A4AQ96JQ5 239 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 MYH1P12882 1939 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 FLT1P17948 1338 aa16.13■□□□□ 0.17
LINC00399-201ENST00000439008 COL2A1P02458 1487 aaPredicted RBP16.12■□□□□ 0.17
LINC00399-201ENST00000439008 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
LINC00399-201ENST00000439008 IGSF3O75054 1194 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 TRPA1O75762 1119 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 BAG3O95817 575 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 EVX2Q03828 476 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 AAMPQ13685 434 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
LINC00399-201ENST00000439008 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 PTPN18Q99952 460 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 R3HDMLQ9H3Y0 253 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.12■□□□□ 0.17
LINC00399-201ENST00000439008 PHIPQ8WWQ0 1821 aa16.12■□□□□ 0.17
LINC00399-201ENST00000439008 IGF2BP3O00425 579 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00399-201ENST00000439008 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
LINC00399-201ENST00000439008 ADD2P35612 726 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 GCC1Q96CN9 775 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 OTUD5Q96G74 571 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 DNAJC18Q9H819 358 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
LINC00399-201ENST00000439008 PALD1Q9ULE6 856 aa16.11■□□□□ 0.17
LINC00399-201ENST00000439008 SPDYE5A6NIY4 337 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 PLCG2P16885 1265 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 JAG1P78504 1218 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 LCORLQ8N3X6 602 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 HOOK2Q96ED9 719 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 NOL10Q9BSC4 688 aaKnown RBP16.1■□□□□ 0.17
LINC00399-201ENST00000439008 CSADQ9Y600 493 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 DOCK1Q14185 1865 aa16.1■□□□□ 0.17
LINC00399-201ENST00000439008 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
LINC00399-201ENST00000439008 NOL9Q5SY16 702 aaKnown RBP16.09■□□□□ 0.17
LINC00399-201ENST00000439008 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 CCDC84Q86UT8 332 aaPredicted RBP16.09■□□□□ 0.17
LINC00399-201ENST00000439008 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 BEGAINQ9BUH8 593 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 ATAD5Q96QE3 1844 aa16.09■□□□□ 0.17
LINC00399-201ENST00000439008 NAV1Q8NEY1 1877 aa16.08■□□□□ 0.17
LINC00399-201ENST00000439008 BAZ2AQ9UIF9 1905 aaKnown RBP16.08■□□□□ 0.16
LINC00399-201ENST00000439008 MAGEB6P1A0A0J9YX57 407 aa16.08■□□□□ 0.16
LINC00399-201ENST00000439008 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
LINC00399-201ENST00000439008 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
LINC00399-201ENST00000439008 IRF6O14896 467 aa16.08■□□□□ 0.16
LINC00399-201ENST00000439008 PRKAB2O43741 272 aa16.08■□□□□ 0.16
LINC00399-201ENST00000439008 TBC1D12O60347 775 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms