RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-214ENST00000435747 NOL9Q5SY16 702 aaKnown RBP13.21□□□□□ -0.29
CPNE1-214ENST00000435747 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 FKBP1CQ5VVH2 108 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 G2E3Q7L622 706 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 WDR63Q8IWG1 891 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 THEGQ9P2T0 379 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 ZNF112Q9UJU3 913 aa13.21□□□□□ -0.29
CPNE1-214ENST00000435747 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
CPNE1-214ENST00000435747 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
CPNE1-214ENST00000435747 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-214ENST00000435747 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
CPNE1-214ENST00000435747 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
CPNE1-214ENST00000435747 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
CPNE1-214ENST00000435747 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-214ENST00000435747 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
CPNE1-214ENST00000435747 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
CPNE1-214ENST00000435747 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 VAMP4O75379 141 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
CPNE1-214ENST00000435747 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
CPNE1-214ENST00000435747 PPM1EQ8WY54 764 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 TRIB2Q92519 343 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 TEKT1Q969V4 418 aa13.19□□□□□ -0.3
CPNE1-214ENST00000435747 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
CPNE1-214ENST00000435747 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 ALYREFQ86V81 257 aaKnown RBP13.18□□□□□ -0.3
CPNE1-214ENST00000435747 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
CPNE1-214ENST00000435747 H7C1W4 665 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
CPNE1-214ENST00000435747 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 FRMPD3Q5JV73 1810 aa13.17□□□□□ -0.3
CPNE1-214ENST00000435747 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 PLIN1O60240 522 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 CSF1RP07333 972 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 CYP2B6P20813 491 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
CPNE1-214ENST00000435747 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-214ENST00000435747 CASP7P55210 303 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
CPNE1-214ENST00000435747 FLIIQ13045 1269 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 GRIK5Q16478 980 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
CPNE1-214ENST00000435747 FAM151AQ8WW52 585 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
CPNE1-214ENST00000435747 GYG1P46976 350 aa13.15□□□□□ -0.3
CPNE1-214ENST00000435747 LHX8Q68G74 356 aa13.15□□□□□ -0.3
CPNE1-214ENST00000435747 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
CPNE1-214ENST00000435747 SALL2Q9Y467 1007 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-214ENST00000435747 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.3
CPNE1-214ENST00000435747 PTPRAP18433 802 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 RTP1P59025 263 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 APOBEC3HQ6NTF7 200 aaKnown RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 BADQ92934 168 aa13.14□□□□□ -0.31
CPNE1-214ENST00000435747 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-214ENST00000435747 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 TCP10Q12799 353 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 GCKRQ14397 625 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-214ENST00000435747 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 CHMP3Q9Y3E7 222 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 MAST3O60307 1309 aa13.13□□□□□ -0.31
CPNE1-214ENST00000435747 XRCC5P13010 732 aaKnown RBP13.12□□□□□ -0.31
CPNE1-214ENST00000435747 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 SOCS4Q8WXH5 440 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-214ENST00000435747 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
CPNE1-214ENST00000435747 DOCK1Q14185 1865 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms