RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 DOCK1Q14185 1865 aa27.59■■■□□ 2.01
HMG20B-205ENST00000435022 ARID4AP29374 1257 aaPredicted RBP27.59■■■□□ 2.01
HMG20B-205ENST00000435022 MAP3K10Q02779 954 aa27.59■■■□□ 2.01
HMG20B-205ENST00000435022 POLA2Q14181 598 aa27.59■■■□□ 2.01
HMG20B-205ENST00000435022 TBC1D9Q6ZT07 1266 aa27.59■■■□□ 2.01
HMG20B-205ENST00000435022 PTPRFP10586 1907 aa27.59■■■□□ 2.01
HMG20B-205ENST00000435022 BRCA2P51587 3418 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 MCAMP43121 646 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 LACTBP83111 547 aaPredicted RBP27.58■■■□□ 2.01
HMG20B-205ENST00000435022 ZKSCAN2Q63HK3 967 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 C17orf99Q6UX52 265 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 ANKRD23Q86SG2 305 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 SPATA5Q8NB90 893 aa27.58■■■□□ 2.01
HMG20B-205ENST00000435022 GPR75-ASB3A0A0A6YYF3 556 aa27.57■■■□□ 2
HMG20B-205ENST00000435022 ZNF333Q96JL9 665 aa27.57■■■□□ 2
HMG20B-205ENST00000435022 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.57■■■□□ 2
HMG20B-205ENST00000435022 KIAA0100Q14667 2235 aaKnown RBP27.56■■■□□ 2
HMG20B-205ENST00000435022 RLBP1P12271 317 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 HNRNPUQ00839 825 aaKnown RBP eCLIP27.56■■■□□ 2
HMG20B-205ENST00000435022 PICALMQ13492 652 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 PRPF38BQ5VTL8 546 aaKnown RBP27.56■■■□□ 2
HMG20B-205ENST00000435022 SPTY2D1Q68D10 685 aaPredicted RBP27.56■■■□□ 2
HMG20B-205ENST00000435022 GPAT2Q6NUI2 795 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 ERICH6Q7L0X2 663 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 NSUN4Q96CB9 384 aaKnown RBP27.56■■■□□ 2
HMG20B-205ENST00000435022 C1orf115Q9H7X2 142 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 CPA4Q9UI42 421 aa27.56■■■□□ 2
HMG20B-205ENST00000435022 MKI67P46013 3256 aaKnown RBP27.56■■■□□ 2
HMG20B-205ENST00000435022 PDHXO00330 501 aa27.55■■■□□ 2
HMG20B-205ENST00000435022 SCYL3Q8IZE3 742 aa27.55■■■□□ 2
HMG20B-205ENST00000435022 MAST2Q6P0Q8 1798 aa27.55■■■□□ 2
HMG20B-205ENST00000435022 G3BP1Q13283 466 aaKnown RBP eCLIP27.54■■■□□ 2
HMG20B-205ENST00000435022 SSH3Q8TE77 659 aa27.54■■■□□ 2
HMG20B-205ENST00000435022 MYO5AQ9Y4I1 1855 aaKnown RBP27.53■■■□□ 2
HMG20B-205ENST00000435022 SIPA1L1O43166 1804 aa27.53■■■□□ 2
HMG20B-205ENST00000435022 ECM2O94769 699 aaPredicted RBP27.53■■■□□ 2
HMG20B-205ENST00000435022 PTPRAP18433 802 aa27.53■■■□□ 2
HMG20B-205ENST00000435022 EN2P19622 333 aaPredicted RBP27.53■■■□□ 2
HMG20B-205ENST00000435022 SLF2Q8IX21 1173 aa27.53■■■□□ 2
HMG20B-205ENST00000435022 CCDC84Q86UT8 332 aaPredicted RBP27.52■■■□□ 2
HMG20B-205ENST00000435022 ZSCAN29Q8IWY8 852 aaPredicted RBP27.52■■■□□ 2
HMG20B-205ENST00000435022 FAM196BA6NMK8 535 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 CXCL11O14625 94 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 ATP8B2P98198 1209 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 TNNI3KQ59H18 835 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 GORABQ5T7V8 394 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 DBNDD2Q9BQY9 259 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 AFG3L2Q9Y4W6 797 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 ZHX2Q9Y6X8 837 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 FPGT-TNNI3KV9GXZ4 949 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 CDK5RAP2Q96SN8 1893 aa27.51■■□□□ 1.99
HMG20B-205ENST00000435022 COL2A1P02458 1487 aaPredicted RBP27.51■■□□□ 1.99
HMG20B-205ENST00000435022 A0A0G2JLL6 359 aaPredicted RBP27.5■■□□□ 1.99
HMG20B-205ENST00000435022 SLC9C1Q4G0N8 1177 aa27.5■■□□□ 1.99
HMG20B-205ENST00000435022 PRRT2Q7Z6L0 340 aaPredicted RBP27.5■■□□□ 1.99
HMG20B-205ENST00000435022 SH3TC2Q8TF17 1288 aa27.5■■□□□ 1.99
HMG20B-205ENST00000435022 TRIM47Q96LD4 638 aa27.5■■□□□ 1.99
HMG20B-205ENST00000435022 NPM3O75607 178 aaKnown RBP27.49■■□□□ 1.99
HMG20B-205ENST00000435022 CYP2C8P10632 490 aa27.49■■□□□ 1.99
HMG20B-205ENST00000435022 GPR108Q9NPR9 543 aa27.49■■□□□ 1.99
HMG20B-205ENST00000435022 SNRKQ9NRH2 765 aa27.49■■□□□ 1.99
HMG20B-205ENST00000435022 RAI14Q9P0K7 980 aa27.49■■□□□ 1.99
HMG20B-205ENST00000435022 ATAD5Q96QE3 1844 aa27.48■■□□□ 1.99
HMG20B-205ENST00000435022 ZBTB7BO15156 539 aaPredicted RBP27.48■■□□□ 1.99
HMG20B-205ENST00000435022 BCRP11274 1271 aa27.48■■□□□ 1.99
HMG20B-205ENST00000435022 RRP1BQ14684 758 aaKnown RBP27.48■■□□□ 1.99
HMG20B-205ENST00000435022 ARHGEF6Q15052 776 aa27.48■■□□□ 1.99
HMG20B-205ENST00000435022 MGAMO43451 1857 aa27.47■■□□□ 1.99
HMG20B-205ENST00000435022 CTNND1O60716 968 aaKnown RBP27.47■■□□□ 1.99
HMG20B-205ENST00000435022 UQCRFS1P1P0C7P4 283 aa27.47■■□□□ 1.99
HMG20B-205ENST00000435022 ADGRA1Q86SQ6 560 aa27.47■■□□□ 1.99
HMG20B-205ENST00000435022 OSBPL5Q9H0X9 879 aaPredicted RBP27.47■■□□□ 1.99
HMG20B-205ENST00000435022 PICK1Q9NRD5 415 aa27.47■■□□□ 1.99
HMG20B-205ENST00000435022 TLR7Q9NYK1 1049 aaKnown RBP27.47■■□□□ 1.99
HMG20B-205ENST00000435022 PSMC4P43686 418 aa27.46■■□□□ 1.99
HMG20B-205ENST00000435022 GSTO1P78417 241 aa27.46■■□□□ 1.99
HMG20B-205ENST00000435022 KIF22Q14807 665 aa27.46■■□□□ 1.99
HMG20B-205ENST00000435022 NOP58Q9Y2X3 529 aaKnown RBP27.46■■□□□ 1.99
HMG20B-205ENST00000435022 FOCADQ5VW36 1801 aa27.46■■□□□ 1.99
HMG20B-205ENST00000435022 LOC285556D6RIA3 1793 aa27.45■■□□□ 1.99
HMG20B-205ENST00000435022 TBC1D12O60347 775 aa27.45■■□□□ 1.98
HMG20B-205ENST00000435022 MYCP01106 439 aaPredicted RBP27.45■■□□□ 1.98
HMG20B-205ENST00000435022 CYP2E1P05181 493 aaPredicted RBP27.45■■□□□ 1.98
HMG20B-205ENST00000435022 LDHCP07864 332 aa27.45■■□□□ 1.98
HMG20B-205ENST00000435022 OSBPP22059 807 aa27.45■■□□□ 1.98
HMG20B-205ENST00000435022 ITPRIPQ8IWB1 547 aa27.45■■□□□ 1.98
HMG20B-205ENST00000435022 SH3RF3Q8TEJ3 882 aaPredicted RBP27.45■■□□□ 1.98
HMG20B-205ENST00000435022 PARK7Q99497 189 aaKnown RBP27.45■■□□□ 1.98
HMG20B-205ENST00000435022 SURF6O75683 361 aaKnown RBP27.44■■□□□ 1.98
HMG20B-205ENST00000435022 GNRH1P01148 92 aa27.44■■□□□ 1.98
HMG20B-205ENST00000435022 LRP2BPQ9P2M1 347 aa27.44■■□□□ 1.98
HMG20B-205ENST00000435022 SRRDQ9UH36 339 aa27.44■■□□□ 1.98
HMG20B-205ENST00000435022 DBNLQ9UJU6 430 aaKnown RBP27.44■■□□□ 1.98
HMG20B-205ENST00000435022 MAP4K4O95819 1239 aaPredicted RBP27.43■■□□□ 1.98
HMG20B-205ENST00000435022 TTC39AQ5SRH9 613 aa27.43■■□□□ 1.98
HMG20B-205ENST00000435022 GADL1Q6ZQY3 521 aa27.43■■□□□ 1.98
HMG20B-205ENST00000435022 FTSJ3Q8IY81 847 aaKnown RBP27.43■■□□□ 1.98
HMG20B-205ENST00000435022 TRIM75PA6NK02 468 aa27.42■■□□□ 1.98
HMG20B-205ENST00000435022 ZAP70P43403 619 aa27.42■■□□□ 1.98
HMG20B-205ENST00000435022 NBPF11Q86T75 865 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms