RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 CCDC57Q2TAC2 916 aa9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 MFSD14BQ5SR56 506 aa9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 ZBED3Q96IU2 234 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 TSR3Q9UJK0 312 aaKnown RBP9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 HTTP42858 3142 aa9.94□□□□□ -0.82
ECHDC1-207ENST00000430841 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 DLL1O00548 723 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 TAF5LO75529 589 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 USP2O75604 605 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 IGKV5-2P06315 115 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 VGLL4Q14135 290 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 BRI3BPQ8WY22 251 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 PRMT6Q96LA8 375 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 ZCCHC17Q9NP64 241 aaKnown RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 ZNF70Q9UC06 446 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 SERPINA10Q9UK55 444 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
ECHDC1-207ENST00000430841 APAF1O14727 1248 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 TLR2O60603 784 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 GJA5P36382 358 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 LACTBP83111 547 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 GCKRQ14397 625 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 LDHAL6AQ6ZMR3 332 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 ERO1BQ86YB8 467 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 CERS5Q8N5B7 392 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 C8orf58Q8NAV2 365 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 TRIM47Q96LD4 638 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 WRNIP1Q96S55 665 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 PTPN18Q99952 460 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 TDRD3Q9H7E2 651 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 ARAP2Q8WZ64 1704 aa9.92□□□□□ -0.82
ECHDC1-207ENST00000430841 MAST3O60307 1309 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 IL1R1P14778 569 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 PDE4AP27815 886 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 GRK4P32298 578 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 TWISTNBQ3B726 338 aaPredicted RBP9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 LINS1Q8NG48 757 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 DNAAF4Q8WXU2 420 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 PLA2G12BQ9BX93 195 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 TMEM39BQ9GZU3 492 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 RNF208Q9H0X6 261 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 PCDHAC2Q9Y5I4 1007 aa9.91□□□□□ -0.82
ECHDC1-207ENST00000430841 CENPFP49454 3210 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 MYPNQ86TC9 1320 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 MKI67P46013 3256 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 SPDYE5A6NIY4 337 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 H7C1W4 665 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 FARP2O94887 1054 aaPredicted RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 ZNF853P0CG23 659 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 HIBADHP31937 336 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 PSMC4P43686 418 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 CRKP46108 304 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 FLIIQ13045 1269 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 CHAF1AQ13111 956 aaPredicted RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 MFSD10Q14728 455 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 CAVIN4Q5BKX8 364 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 C15orf52Q6ZUT6 534 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 TBC1D22AQ8WUA7 517 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 TEKT1Q969V4 418 aa9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 PARK7Q99497 189 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 LARP6Q9BRS8 491 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-207ENST00000430841 A0A1B0GUL6 1792 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 CCL5P13501 91 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 FCGRTP55899 365 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 PPIL2Q13356 520 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 TSR2Q969E8 191 aaKnown RBP9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 C9orf78Q9NZ63 289 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 SRRDQ9UH36 339 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 CPA4Q9UI42 421 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 RIPOR2Q9Y4F9 1068 aa9.89□□□□□ -0.83
ECHDC1-207ENST00000430841 FAM205AQ6ZU69 1335 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 AK9Q5TCS8 1911 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 A0A1W2PPC1 479 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 BTBD19C9JJ37 291 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 C3orf80F5H4A9 247 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 SNAP23O00161 211 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 CSF1RP07333 972 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 ZNF341Q9BYN7 854 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 ARHGAP39Q9C0H5 1083 aa9.88□□□□□ -0.83
ECHDC1-207ENST00000430841 CUL9Q8IWT3 2517 aa9.87□□□□□ -0.83
ECHDC1-207ENST00000430841 PDHXO00330 501 aa9.87□□□□□ -0.83
ECHDC1-207ENST00000430841 TFRCP02786 760 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-207ENST00000430841 GJB1P08034 283 aa9.87□□□□□ -0.83
ECHDC1-207ENST00000430841 GYG1P46976 350 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms