RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
DEPDC7-203ENST00000427755 CPA4Q9UI42 421 aa16.15■□□□□ 0.18
DEPDC7-203ENST00000427755 MROH7-TTC4A0A0A0MT08 1334 aa16.15■□□□□ 0.18
DEPDC7-203ENST00000427755 GPR75-ASB3A0A0A6YYF3 556 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 CXCL11O14625 94 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 SLC9C1Q4G0N8 1177 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 GPAT2Q6NUI2 795 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 SLF2Q8IX21 1173 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 SCYL3Q8IZE3 742 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.17
DEPDC7-203ENST00000427755 GNRH1P01148 92 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 PTPRAP18433 802 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 ARID4AP29374 1257 aaPredicted RBP16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 KIF22Q14807 665 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 SPATA5Q8NB90 893 aa16.13■□□□□ 0.17
DEPDC7-203ENST00000427755 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 PICALMQ13492 652 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 SH3TC2Q8TF17 1288 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 NSUN4Q96CB9 384 aaKnown RBP16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 AFG3L2Q9Y4W6 797 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
DEPDC7-203ENST00000427755 A0A0G2JLL6 359 aaPredicted RBP16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 BCRP11274 1271 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 MCAMP43121 646 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 PSMC4P43686 418 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 PRMT2P55345 433 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 POLA2Q14181 598 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 PRRT2Q7Z6L0 340 aaPredicted RBP16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 TMEM106CQ9BVX2 250 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 PICK1Q9NRD5 415 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 BRCA2P51587 3418 aa16.11■□□□□ 0.17
DEPDC7-203ENST00000427755 TBC1D12O60347 775 aa16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 CYP2C8P10632 490 aa16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 PARK7Q99497 189 aaKnown RBP16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
DEPDC7-203ENST00000427755 CENPFP49454 3210 aa16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 MKI67P46013 3256 aaKnown RBP16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 OSBPP22059 807 aa16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 GSTO1P78417 241 aa16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 SLC4A8Q2Y0W8 1093 aa16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 FASTKD5Q7L8L6 764 aaKnown RBP16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
DEPDC7-203ENST00000427755 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 LDHCP07864 332 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 ATP8B2P98198 1209 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 GPR108Q9NPR9 543 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 ZSWIM8A7E2V4 1837 aa16.08■□□□□ 0.16
DEPDC7-203ENST00000427755 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 FMNL1O95466 1100 aaPredicted RBP16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 RLBP1P12271 317 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 HOXD10P28358 340 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 DBNDD2Q9BQY9 259 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 COL2A1P02458 1487 aaPredicted RBP16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 RBBP6Q7Z6E9 1792 aaKnown RBP16.07■□□□□ 0.16
DEPDC7-203ENST00000427755 MYPNQ86TC9 1320 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 MTFR1Q15390 333 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 LRP2BPQ9P2M1 347 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 MYH2Q9UKX2 1941 aa16.06■□□□□ 0.16
DEPDC7-203ENST00000427755 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 GRK4P32298 578 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 FCGRTP55899 365 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 PRKCZQ05513 592 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 TEX11Q8IYF3 940 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 RAET1EQ8TD07 263 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 SHISA4Q96DD7 197 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 AGTPBP1Q9UPW5 1226 aa16.05■□□□□ 0.16
DEPDC7-203ENST00000427755 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
DEPDC7-203ENST00000427755 CYP2E1P05181 493 aaPredicted RBP16.04■□□□□ 0.16
DEPDC7-203ENST00000427755 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms