RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 MAST2Q6P0Q8 1798 aa22.79■■□□□ 1.24
SREBF1-206ENST00000423161 ARID4AP29374 1257 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-206ENST00000423161 PICALMQ13492 652 aa22.79■■□□□ 1.24
SREBF1-206ENST00000423161 SH3BP5LQ7L8J4 393 aa22.79■■□□□ 1.24
SREBF1-206ENST00000423161 SPATA5Q8NB90 893 aa22.79■■□□□ 1.24
SREBF1-206ENST00000423161 PTCH2Q9Y6C5 1203 aa22.79■■□□□ 1.24
SREBF1-206ENST00000423161 MYO5AQ9Y4I1 1855 aaKnown RBP22.79■■□□□ 1.24
SREBF1-206ENST00000423161 ATAD5Q96QE3 1844 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 DDTLA6NHG4 134 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-206ENST00000423161 PHF20L1A8MW92 1017 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 PDHXO00330 501 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 MGAMO43451 1857 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 LACTBP83111 547 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-206ENST00000423161 PRPF38BQ5VTL8 546 aaKnown RBP22.78■■□□□ 1.24
SREBF1-206ENST00000423161 MIER1Q8N108 512 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 ZNF384Q8TF68 577 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 ARHGAP39Q9C0H5 1083 aa22.78■■□□□ 1.24
SREBF1-206ENST00000423161 GPR75-ASB3A0A0A6YYF3 556 aa22.77■■□□□ 1.24
SREBF1-206ENST00000423161 SLC34A2O95436 690 aa22.77■■□□□ 1.24
SREBF1-206ENST00000423161 SLC9C1Q4G0N8 1177 aa22.77■■□□□ 1.24
SREBF1-206ENST00000423161 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
SREBF1-206ENST00000423161 SCYL3Q8IZE3 742 aa22.77■■□□□ 1.24
SREBF1-206ENST00000423161 LDHCP07864 332 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 MCAMP43121 646 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 RHBDL3P58872 404 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 GSTO1P78417 241 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 MOGSQ13724 837 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 POLA2Q14181 598 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 C17orf99Q6UX52 265 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 FTSJ3Q8IY81 847 aaKnown RBP22.76■■□□□ 1.23
SREBF1-206ENST00000423161 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
SREBF1-206ENST00000423161 PICK1Q9NRD5 415 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 RAI14Q9P0K7 980 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 CPA4Q9UI42 421 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 CDK5RAP2Q96SN8 1893 aa22.76■■□□□ 1.23
SREBF1-206ENST00000423161 CXCL11O14625 94 aa22.75■■□□□ 1.23
SREBF1-206ENST00000423161 UQCRFS1P1P0C7P4 283 aa22.75■■□□□ 1.23
SREBF1-206ENST00000423161 OS9Q13438 667 aaPredicted RBP22.75■■□□□ 1.23
SREBF1-206ENST00000423161 NBPF11Q86T75 865 aa22.75■■□□□ 1.23
SREBF1-206ENST00000423161 ZNF333Q96JL9 665 aa22.75■■□□□ 1.23
SREBF1-206ENST00000423161 ADGRA2Q96PE1 1338 aa22.75■■□□□ 1.23
SREBF1-206ENST00000423161 ECM2O94769 699 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-206ENST00000423161 GNRH1P01148 92 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 SLURP2P0DP57 97 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 PTPRAP18433 802 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 MAP3K10Q02779 954 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 C1orf115Q9H7X2 142 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 GPR108Q9NPR9 543 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
SREBF1-206ENST00000423161 FOCADQ5VW36 1801 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 ATP8B2P98198 1209 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 TNNI3KQ59H18 835 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 PARK7Q99497 189 aaKnown RBP22.73■■□□□ 1.23
SREBF1-206ENST00000423161 TMEM106CQ9BVX2 250 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 LRP2BPQ9P2M1 347 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 FPGT-TNNI3KV9GXZ4 949 aa22.73■■□□□ 1.23
SREBF1-206ENST00000423161 A0A0G2JLL6 359 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 CTNND1O60716 968 aaKnown RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 NPM3O75607 178 aaKnown RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 MAP4K4O95819 1239 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 TTC39AQ5SRH9 613 aa22.72■■□□□ 1.23
SREBF1-206ENST00000423161 DIEXFQ68CQ4 756 aaKnown RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 GPAT2Q6NUI2 795 aa22.72■■□□□ 1.23
SREBF1-206ENST00000423161 PRRT2Q7Z6L0 340 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 COL2A1P02458 1487 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-206ENST00000423161 MKI67P46013 3256 aaKnown RBP22.71■■□□□ 1.23
SREBF1-206ENST00000423161 SURF6O75683 361 aaKnown RBP22.71■■□□□ 1.23
SREBF1-206ENST00000423161 RLBP1P12271 317 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 EN2P19622 333 aaPredicted RBP22.71■■□□□ 1.23
SREBF1-206ENST00000423161 PSMC4P43686 418 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 PRMT2P55345 433 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 GADL1Q6ZQY3 521 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 DBNDD2Q9BQY9 259 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 SNRKQ9NRH2 765 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 AFG3L2Q9Y4W6 797 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 SIPA1L1O43166 1804 aa22.71■■□□□ 1.23
SREBF1-206ENST00000423161 FAM196BA6NMK8 535 aa22.7■■□□□ 1.22
SREBF1-206ENST00000423161 CTGFP29279 349 aa22.7■■□□□ 1.22
SREBF1-206ENST00000423161 CCDC158Q5M9N0 1113 aa22.7■■□□□ 1.22
SREBF1-206ENST00000423161 FASTKD5Q7L8L6 764 aaKnown RBP22.7■■□□□ 1.22
SREBF1-206ENST00000423161 SH3TC2Q8TF17 1288 aa22.7■■□□□ 1.22
SREBF1-206ENST00000423161 TRIM47Q96LD4 638 aa22.7■■□□□ 1.22
SREBF1-206ENST00000423161 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
SREBF1-206ENST00000423161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
SREBF1-206ENST00000423161 TBC1D12O60347 775 aa22.69■■□□□ 1.22
SREBF1-206ENST00000423161 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-206ENST00000423161 CYP2C8P10632 490 aa22.69■■□□□ 1.22
SREBF1-206ENST00000423161 SLC4A8Q2Y0W8 1093 aa22.69■■□□□ 1.22
SREBF1-206ENST00000423161 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
SREBF1-206ENST00000423161 OSBPL5Q9H0X9 879 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-206ENST00000423161 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-206ENST00000423161 BRCA2P51587 3418 aa22.69■■□□□ 1.22
SREBF1-206ENST00000423161 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
SREBF1-206ENST00000423161 ZBTB7BO15156 539 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-206ENST00000423161 FMNL1O95466 1100 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-206ENST00000423161 NAA16Q6N069 864 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-206ENST00000423161 CCDC84Q86UT8 332 aaPredicted RBP22.68■■□□□ 1.22
SREBF1-206ENST00000423161 SRRDQ9UH36 339 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms