RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 TRPV1Q8NER1 839 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 TBC1D16Q8TBP0 767 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 GRAPLQ8TC17 118 aaPredicted RBP2.75□□□□□ -1.97
UBE2W-202ENST00000422906 PHOX2BQ99453 314 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 TRRAPQ9Y4A5 3859 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 H0YIN7 160 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 GPSM2P81274 684 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 FKBP1CQ5VVH2 108 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 MPRIPQ6WCQ1 1025 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 FAM43AQ8N2R8 423 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 FAT2Q9NYQ8 4349 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 ZFHX2Q9C0A1 2572 aaPredicted RBP2.75□□□□□ -1.97
UBE2W-202ENST00000422906 PRR23AA6NEV1 266 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 C10orf142B7Z368 130 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 TLR2O60603 784 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 CELF2O95319 508 aaKnown RBP2.75□□□□□ -1.97
UBE2W-202ENST00000422906 HOXC6P09630 235 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 HOXD8P13378 290 aaPredicted RBP2.75□□□□□ -1.97
UBE2W-202ENST00000422906 NBPF9Q3BBW0 867 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 NLRP10Q86W26 655 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 IL27Q8NEV9 243 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 KAZALD1Q96I82 304 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 PHACTR3Q96KR7 559 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 GPHNQ9NQX3 736 aaPredicted RBP2.75□□□□□ -1.97
UBE2W-202ENST00000422906 HDAC9Q9UKV0 1011 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 SCN8AQ9UQD0 1980 aa2.75□□□□□ -1.97
UBE2W-202ENST00000422906 CFAP46Q8IYW2 2715 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 SHISA7A6NL88 538 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 GFRA3O60609 400 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 PHF14O94880 888 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 MYT1Q01538 1121 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 MAMDC4Q6UXC1 1216 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 ANKRD33Q7Z3H0 272 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 ZKSCAN4Q969J2 545 aaPredicted RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 RXFP3Q9NSD7 469 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 NLRP2Q9NX02 1062 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 MYBBP1AQ9BQG0 1328 aaKnown RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 TTC3P53804 2025 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 KIAA0355O15063 1070 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 PAK3O75914 559 aaPredicted RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 SGPL1O95470 568 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 ADRB1P08588 477 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 AOC3Q16853 763 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 KIAA0319Q5VV43 1072 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 TRMT44Q8IYL2 757 aaKnown RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 CRACR2BQ8N4Y2 399 aaPredicted RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 HERVK_113Q902F9 699 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 UPF3AQ9H1J1 476 aaKnown RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 SH2B1Q9NRF2 756 aaPredicted RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 LCHNA4D1U4 455 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 SH3BP5LQ7L8J4 393 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 DGLUCYQ7Z3D6 616 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 DDX54Q8TDD1 881 aaKnown RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 FAM212AQ96EL1 285 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 CHRDQ9H2X0 955 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 USP24Q9UPU5 2620 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 KALRNO60229 2985 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 EPOPA6NHQ4 379 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 TBC1D8O95759 1140 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 FGFR2P21802 821 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 NOVP48745 357 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 LRRC26Q2I0M4 334 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 CTC1Q2NKJ3 1217 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 DDX1Q92499 740 aaKnown RBP2.74□□□□□ -1.97
UBE2W-202ENST00000422906 PCDHAC2Q9Y5I4 1007 aa2.74□□□□□ -1.97
UBE2W-202ENST00000422906 ARHGEF15O94989 841 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 PSEN1P49768 467 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 MTFR1Q15390 333 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 MICALL2Q8IY33 904 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 CCDC24Q8N4L8 307 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 DIS3LQ8TF46 1054 aaKnown RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 CNTNAP3BQ96NU0 1288 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 CNTNAP3Q9BZ76 1288 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 AFG3L2Q9Y4W6 797 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 BOD1L1Q8NFC6 3051 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 FBN2P35556 2912 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 TRIM43BA6NCK2 446 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 SNPHO15079 494 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 XRCC5P13010 732 aaKnown RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 RFC4P35249 363 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 MAGEA10P43363 369 aaPredicted RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 RRP1BQ14684 758 aaKnown RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 MOB2Q70IA6 237 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 Q7L0L9 218 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 HELBQ8NG08 1087 aaPredicted RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 NEK9Q8TD19 979 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 TRIM43Q96BQ3 446 aaPredicted RBP2.73□□□□□ -1.97
UBE2W-202ENST00000422906 MYOZ2Q9NPC6 264 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 SVEP1Q4LDE5 3571 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 ALDH1B1P30837 517 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 GLIS3Q8NEA6 775 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 COG3Q96JB2 828 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 SRRDQ9UH36 339 aa2.73□□□□□ -1.97
UBE2W-202ENST00000422906 ZNF521Q96K83 1311 aa2.72□□□□□ -1.97
UBE2W-202ENST00000422906 MANSC4A6NHS7 340 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms