RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 LACTBP83111 547 aaPredicted RBP26.88■■□□□ 1.89
ACTB-203ENST00000417101 KIF22Q14807 665 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 PRPF38BQ5VTL8 546 aaKnown RBP26.88■■□□□ 1.89
ACTB-203ENST00000417101 TBC1D9Q6ZT07 1266 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 MIER1Q8N108 512 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 ZNF384Q8TF68 577 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 ARHGAP39Q9C0H5 1083 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 DDTLA6NHG4 134 aaPredicted RBP26.87■■□□□ 1.89
ACTB-203ENST00000417101 SLC34A2O95436 690 aa26.87■■□□□ 1.89
ACTB-203ENST00000417101 MOGSQ13724 837 aa26.87■■□□□ 1.89
ACTB-203ENST00000417101 KIAA0100Q14667 2235 aaKnown RBP26.87■■□□□ 1.89
ACTB-203ENST00000417101 GPR75-ASB3A0A0A6YYF3 556 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 ARID4AP29374 1257 aaPredicted RBP26.86■■□□□ 1.89
ACTB-203ENST00000417101 SLC9C1Q4G0N8 1177 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 C17orf99Q6UX52 265 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 SCYL3Q8IZE3 742 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 PICK1Q9NRD5 415 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 CPA4Q9UI42 421 aa26.86■■□□□ 1.89
ACTB-203ENST00000417101 CXCL11O14625 94 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 ECM2O94769 699 aaPredicted RBP26.85■■□□□ 1.89
ACTB-203ENST00000417101 SLURP2P0DP57 97 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 RHBDL3P58872 404 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 NSUN4Q96CB9 384 aaKnown RBP26.85■■□□□ 1.89
ACTB-203ENST00000417101 ZNF333Q96JL9 665 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 RAI14Q9P0K7 980 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 ZHX2Q9Y6X8 837 aa26.85■■□□□ 1.89
ACTB-203ENST00000417101 DOCK2Q92608 1830 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 LDHCP07864 332 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 MCAMP43121 646 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 GSTO1P78417 241 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 MAP3K10Q02779 954 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 POLA2Q14181 598 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 NBPF11Q86T75 865 aa26.84■■□□□ 1.89
ACTB-203ENST00000417101 UQCRFS1P1P0C7P4 283 aa26.83■■□□□ 1.89
ACTB-203ENST00000417101 FTSJ3Q8IY81 847 aaKnown RBP26.83■■□□□ 1.89
ACTB-203ENST00000417101 C1orf115Q9H7X2 142 aa26.83■■□□□ 1.89
ACTB-203ENST00000417101 ZSWIM8A7E2V4 1837 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 PTPRAP18433 802 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 EN2P19622 333 aaPredicted RBP26.82■■□□□ 1.88
ACTB-203ENST00000417101 ATP8B2P98198 1209 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 OS9Q13438 667 aaPredicted RBP26.82■■□□□ 1.88
ACTB-203ENST00000417101 GPAT2Q6NUI2 795 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 SSH3Q8TE77 659 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 TMEM106CQ9BVX2 250 aa26.82■■□□□ 1.88
ACTB-203ENST00000417101 GNRH1P01148 92 aa26.81■■□□□ 1.88
ACTB-203ENST00000417101 GPR108Q9NPR9 543 aa26.81■■□□□ 1.88
ACTB-203ENST00000417101 LRP2BPQ9P2M1 347 aa26.81■■□□□ 1.88
ACTB-203ENST00000417101 ADGRA2Q96PE1 1338 aa26.81■■□□□ 1.88
ACTB-203ENST00000417101 CTNND1O60716 968 aaKnown RBP26.8■■□□□ 1.88
ACTB-203ENST00000417101 TNNI3KQ59H18 835 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 ITPRIPQ8IWB1 547 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 SH3TC2Q8TF17 1288 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 PARK7Q99497 189 aaKnown RBP26.8■■□□□ 1.88
ACTB-203ENST00000417101 SNRKQ9NRH2 765 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 AFG3L2Q9Y4W6 797 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 FPGT-TNNI3KV9GXZ4 949 aa26.8■■□□□ 1.88
ACTB-203ENST00000417101 A0A0G2JLL6 359 aaPredicted RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 NPM3O75607 178 aaKnown RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 SURF6O75683 361 aaKnown RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 MAP4K4O95819 1239 aaPredicted RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 MYCP01106 439 aaPredicted RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 RLBP1P12271 317 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 CTGFP29279 349 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 PSMC4P43686 418 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 TTC39AQ5SRH9 613 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 PRRT2Q7Z6L0 340 aaPredicted RBP26.79■■□□□ 1.88
ACTB-203ENST00000417101 TRIM47Q96LD4 638 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 DBNDD2Q9BQY9 259 aa26.79■■□□□ 1.88
ACTB-203ENST00000417101 FAM196BA6NMK8 535 aa26.78■■□□□ 1.88
ACTB-203ENST00000417101 CYP2C8P10632 490 aa26.78■■□□□ 1.88
ACTB-203ENST00000417101 PRMT2P55345 433 aa26.78■■□□□ 1.88
ACTB-203ENST00000417101 GADL1Q6ZQY3 521 aa26.78■■□□□ 1.88
ACTB-203ENST00000417101 FASTKD5Q7L8L6 764 aaKnown RBP26.78■■□□□ 1.88
ACTB-203ENST00000417101 RBBP6Q7Z6E9 1792 aaKnown RBP26.77■■□□□ 1.88
ACTB-203ENST00000417101 TBC1D12O60347 775 aa26.77■■□□□ 1.88
ACTB-203ENST00000417101 FMNL1O95466 1100 aaPredicted RBP26.77■■□□□ 1.88
ACTB-203ENST00000417101 SLC4A8Q2Y0W8 1093 aa26.77■■□□□ 1.88
ACTB-203ENST00000417101 CCDC158Q5M9N0 1113 aa26.77■■□□□ 1.88
ACTB-203ENST00000417101 TEX11Q8IYF3 940 aa26.77■■□□□ 1.88
ACTB-203ENST00000417101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.77■■□□□ 1.882e-7■■□□□ 13.3
ACTB-203ENST00000417101 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.77■■□□□ 1.88
ACTB-203ENST00000417101 TRIM75PA6NK02 468 aa26.76■■□□□ 1.87
ACTB-203ENST00000417101 ZBTB7BO15156 539 aaPredicted RBP26.76■■□□□ 1.87
ACTB-203ENST00000417101 CCDC84Q86UT8 332 aaPredicted RBP26.76■■□□□ 1.87
ACTB-203ENST00000417101 OSBPL5Q9H0X9 879 aaPredicted RBP26.76■■□□□ 1.87
ACTB-203ENST00000417101 SRRDQ9UH36 339 aa26.76■■□□□ 1.87
ACTB-203ENST00000417101 OSBPP22059 807 aa26.75■■□□□ 1.87
ACTB-203ENST00000417101 SH3RF3Q8TEJ3 882 aaPredicted RBP26.75■■□□□ 1.87
ACTB-203ENST00000417101 NOL10Q9BSC4 688 aaKnown RBP26.75■■□□□ 1.87
ACTB-203ENST00000417101 BCRP11274 1271 aa26.74■■□□□ 1.87
ACTB-203ENST00000417101 HOXD10P28358 340 aa26.74■■□□□ 1.87
ACTB-203ENST00000417101 NAA16Q6N069 864 aaPredicted RBP26.74■■□□□ 1.87
ACTB-203ENST00000417101 DOCK1Q14185 1865 aa26.73■■□□□ 1.87
ACTB-203ENST00000417101 NOP58Q9Y2X3 529 aaKnown RBP26.73■■□□□ 1.87
ACTB-203ENST00000417101 COL2A1P02458 1487 aaPredicted RBP26.73■■□□□ 1.87
ACTB-203ENST00000417101 CYP2E1P05181 493 aaPredicted RBP26.72■■□□□ 1.87
ACTB-203ENST00000417101 RAET1EQ8TD07 263 aa26.72■■□□□ 1.87
ACTB-203ENST00000417101 AATFQ9NY61 560 aaKnown RBP eCLIP26.72■■□□□ 1.871e-22■□□□□ 9.8
ACTB-203ENST00000417101 DBNLQ9UJU6 430 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms