RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 NUP133Q8WUM0 1156 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 TCHHQ07283 1943 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
SCN4B-202ENST00000415030 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
SCN4B-202ENST00000415030 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
SCN4B-202ENST00000415030 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 AFAP1L1Q8TED9 768 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 PCDHA5Q9Y5H7 936 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
SCN4B-202ENST00000415030 CCDC181Q5TID7 509 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 SIGLEC1Q9BZZ2 1709 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 MYO1CO00159 1063 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
SCN4B-202ENST00000415030 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 IFIT5Q13325 482 aaKnown RBP13.16□□□□□ -0.3
SCN4B-202ENST00000415030 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
SCN4B-202ENST00000415030 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
SCN4B-202ENST00000415030 PHACTR2O75167 634 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 DHX58Q96C10 678 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 MRFAP1Q9Y605 127 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 TDO2P48775 406 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 KRT23Q9C075 422 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 UTYO14607 1347 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 CYP26C1Q6V0L0 522 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 MAST3O60307 1309 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 EBAG9O00559 213 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 ZBTB22O15209 634 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 KRT83P78385 493 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
SCN4B-202ENST00000415030 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 MYO1AQ9UBC5 1043 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
SCN4B-202ENST00000415030 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
SCN4B-202ENST00000415030 CDR1P51861 262 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 RTN1Q16799 776 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
SCN4B-202ENST00000415030 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
SCN4B-202ENST00000415030 SPA17Q15506 151 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 MICALCLQ6ZW33 695 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
SCN4B-202ENST00000415030 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 CYLC1P35663 651 aaPredicted RBP13.14□□□□□ -0.31
SCN4B-202ENST00000415030 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
SCN4B-202ENST00000415030 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
SCN4B-202ENST00000415030 IGKV5-2P06315 115 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 AFMP43652 599 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 TUBE1Q9UJT0 475 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 KRT86O43790 486 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 PLCD1P51178 756 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 FAM76AQ8TAV0 307 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 GPAA1O43292 621 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 OPA1O60313 960 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 MAP3K12Q12852 859 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
SCN4B-202ENST00000415030 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF446Q9NWS9 450 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 A6NNZ2 444 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 ZNF609O15014 1411 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 STX17P56962 302 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 TUBB8Q3ZCM7 444 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
SCN4B-202ENST00000415030 FEZ2Q9UHY8 353 aaPredicted RBP13.13□□□□□ -0.31
SCN4B-202ENST00000415030 FGAP02671 866 aa13.12□□□□□ -0.31
SCN4B-202ENST00000415030 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms