RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.25□□□□□ -0.45
TMEM248-202ENST00000413593 SH3BP5LQ7L8J4 393 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 MAGEB6Q8N7X4 407 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 SH3RF3Q8TEJ3 882 aaPredicted RBP12.25□□□□□ -0.45
TMEM248-202ENST00000413593 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 SLC10A4Q96EP9 437 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
TMEM248-202ENST00000413593 HAUS7Q99871 368 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 PAG1Q9NWQ8 432 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
TMEM248-202ENST00000413593 PLCG2P16885 1265 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
TMEM248-202ENST00000413593 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 SPRYD7Q5W111 196 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 ZNF341Q9BYN7 854 aa12.24□□□□□ -0.45
TMEM248-202ENST00000413593 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 ZBTB48P10074 688 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 PDE6AP16499 860 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 CTCFP49711 727 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 VGLL4Q14135 290 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 SLC9C2Q5TAH2 1124 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 ZSCAN29Q8IWY8 852 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 WRNIP1Q96S55 665 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
TMEM248-202ENST00000413593 CSADQ9Y600 493 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 MYH2Q9UKX2 1941 aa12.23□□□□□ -0.45
TMEM248-202ENST00000413593 TTC41PQ6P2S7 1318 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 CA12O43570 354 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 HSPA8P11142 646 aaKnown RBP12.22□□□□□ -0.45
TMEM248-202ENST00000413593 GJA5P36382 358 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
TMEM248-202ENST00000413593 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 ZNF112Q9UJU3 913 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
TMEM248-202ENST00000413593 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
TMEM248-202ENST00000413593 FLT1P17948 1338 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 IGHDP01880 384 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 SLURP2P0DP57 97 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 INPP5BP32019 993 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 SMC5Q8IY18 1101 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 ZKSCAN4Q969J2 545 aaPredicted RBP12.21□□□□□ -0.45
TMEM248-202ENST00000413593 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
TMEM248-202ENST00000413593 RIOK1Q9BRS2 568 aaKnown RBP12.21□□□□□ -0.45
TMEM248-202ENST00000413593 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
TMEM248-202ENST00000413593 PCNTO95613 3336 aa12.21□□□□□ -0.46
TMEM248-202ENST00000413593 MAGEB6P1A0A0J9YX57 407 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 MX1P20591 662 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 TM4SF4P48230 202 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 LBX1P52954 281 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 SREBF2Q12772 1141 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.2□□□□□ -0.46
TMEM248-202ENST00000413593 RNF186Q9NXI6 227 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
TMEM248-202ENST00000413593 DOCK2Q92608 1830 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 MANSC4A6NHS7 340 aaPredicted RBP12.19□□□□□ -0.46
TMEM248-202ENST00000413593 ERC2O15083 957 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 TBC1D12O60347 775 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 TRPA1O75762 1119 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 GLRX3O76003 335 aaKnown RBP12.19□□□□□ -0.46
TMEM248-202ENST00000413593 ADD2P35612 726 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 SLFNL1Q499Z3 407 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
TMEM248-202ENST00000413593 ERO1BQ86YB8 467 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 DHX36Q9H2U1 1008 aaKnown RBP12.19□□□□□ -0.46
TMEM248-202ENST00000413593 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
TMEM248-202ENST00000413593 FAM196BA6NMK8 535 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 CHGBP05060 677 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 USP5P45974 858 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 INHBEP58166 350 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
TMEM248-202ENST00000413593 ZSCAN25Q6NSZ9 544 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms