RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 NEUROD6Q96NK8 337 aa13.76□□□□□ -0.21
SRMP1-201ENST00000398959 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
SRMP1-201ENST00000398959 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
SRMP1-201ENST00000398959 LOC285556D6RIA3 1793 aa13.76□□□□□ -0.21
SRMP1-201ENST00000398959 MROH7-TTC4A0A0A0MT08 1334 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 MYH1P12882 1939 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 BTDP43251 543 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 PICALMQ13492 652 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 MTX1Q13505 466 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 SCYL3Q8IZE3 742 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
SRMP1-201ENST00000398959 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
SRMP1-201ENST00000398959 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 ATRNL1Q5VV63 1379 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 PHF20L1A8MW92 1017 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 CXCL11O14625 94 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
SRMP1-201ENST00000398959 GNAI2P04899 355 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 TRIM27P14373 513 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 HOXD10P28358 340 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 PSMC4P43686 418 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
SRMP1-201ENST00000398959 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 SIPA1L1O43166 1804 aa13.74□□□□□ -0.21
SRMP1-201ENST00000398959 ADGRA2Q96PE1 1338 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
SRMP1-201ENST00000398959 MECOMQ03112 1051 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.21
SRMP1-201ENST00000398959 MOGSQ13724 837 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 FASTKD5Q7L8L6 764 aaKnown RBP13.73□□□□□ -0.21
SRMP1-201ENST00000398959 RAET1EQ8TD07 263 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
SRMP1-201ENST00000398959 TRIM47Q96LD4 638 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 DDX4Q9NQI0 724 aaKnown RBP13.73□□□□□ -0.21
SRMP1-201ENST00000398959 SRRDQ9UH36 339 aa13.73□□□□□ -0.21
SRMP1-201ENST00000398959 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
SRMP1-201ENST00000398959 BCAR3O75815 825 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 CYP2C8P10632 490 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 PTPRAP18433 802 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 OSBPP22059 807 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 CTGFP29279 349 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 GSTO1P78417 241 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
SRMP1-201ENST00000398959 SPATA5Q8NB90 893 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 TNNQ9UQP3 1299 aa13.72□□□□□ -0.21
SRMP1-201ENST00000398959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
SRMP1-201ENST00000398959 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 CTNND1O60716 968 aaKnown RBP13.71□□□□□ -0.21
SRMP1-201ENST00000398959 LDHCP07864 332 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 GPAT2Q6NUI2 795 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 RAI14Q9P0K7 980 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
SRMP1-201ENST00000398959 PNMA6EA0A0J9YXQ4 647 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 BCRP11274 1271 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
SRMP1-201ENST00000398959 GRK4P32298 578 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 FCGRTP55899 365 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 RHBDL3P58872 404 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 TBC1D9Q6ZT07 1266 aa13.7□□□□□ -0.22
SRMP1-201ENST00000398959 NSUN4Q96CB9 384 aaKnown RBP13.7□□□□□ -0.22
SRMP1-201ENST00000398959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRMP1-201ENST00000398959 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
SRMP1-201ENST00000398959 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 UQCRFS1P1P0C7P4 283 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 MCAMP43121 646 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 OS9Q13438 667 aaPredicted RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 MTFR1Q15390 333 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 SMCR8Q8TEV9 937 aaPredicted RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 ZNF384Q8TF68 577 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
SRMP1-201ENST00000398959 SLC45A1Q9Y2W3 748 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 CEP290O15078 2479 aa13.69□□□□□ -0.22
SRMP1-201ENST00000398959 MYH8P13535 1937 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 TBC1D12O60347 775 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
SRMP1-201ENST00000398959 UBXN2AP68543 259 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 PRKCZQ05513 592 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
SRMP1-201ENST00000398959 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 ZKSCAN2Q63HK3 967 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
SRMP1-201ENST00000398959 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms