RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 RPAP1Q9BWH6 1393 aaPredicted RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 RNF113AO15541 343 aaKnown RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 PRKAB2O43741 272 aa19.07■□□□□ 0.64
MBD1-207ENST00000398488 SUPT20HL1Q3ZLR7 823 aa19.07■□□□□ 0.64
MBD1-207ENST00000398488 CYP4F22Q6NT55 531 aa19.07■□□□□ 0.64
MBD1-207ENST00000398488 SEC62Q99442 399 aaKnown RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 NOL10Q9BSC4 688 aaKnown RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 ANGEL1Q9UNK9 670 aaKnown RBP19.07■□□□□ 0.64
MBD1-207ENST00000398488 FLT1P17948 1338 aa19.07■□□□□ 0.64
MBD1-207ENST00000398488 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
MBD1-207ENST00000398488 MBD4O95243 580 aa19.06■□□□□ 0.64
MBD1-207ENST00000398488 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
MBD1-207ENST00000398488 TTLL12Q14166 644 aaPredicted RBP19.06■□□□□ 0.64
MBD1-207ENST00000398488 DEFB115Q30KQ5 88 aa19.06■□□□□ 0.64
MBD1-207ENST00000398488 FSD1Q9BTV5 496 aa19.06■□□□□ 0.64
MBD1-207ENST00000398488 FOCADQ5VW36 1801 aa19.06■□□□□ 0.64
MBD1-207ENST00000398488 M0R2C6 588 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 NF2P35240 595 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 VEGFBP49765 207 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 EVX2Q03828 476 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 LDLRAD1Q5T700 205 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 TMED8Q6PL24 325 aaPredicted RBP19.05■□□□□ 0.64
MBD1-207ENST00000398488 EVI5LQ96CN4 794 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 CLMNQ96JQ2 1002 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
MBD1-207ENST00000398488 PLCG2P16885 1265 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 FKBP1BP68106 108 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 MAP3K11Q16584 847 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 SDR42E1Q8WUS8 393 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 ZIC5Q96T25 663 aa19.05■□□□□ 0.64
MBD1-207ENST00000398488 FAM196BA6NMK8 535 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 ZSCAN25Q6NSZ9 544 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
MBD1-207ENST00000398488 APPBP2Q92624 585 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 RILPL2Q969X0 211 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 KLRG1Q96E93 195 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 CSRNP1Q96S65 589 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.04■□□□□ 0.64
MBD1-207ENST00000398488 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 SIPA1L1O43166 1804 aa19.04■□□□□ 0.64
MBD1-207ENST00000398488 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 FAM155AB1AL88 458 aaPredicted RBP19.03■□□□□ 0.64
MBD1-207ENST00000398488 SMIM22K7EJ46 135 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 GRM1Q13255 1194 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 ZMYM1Q5SVZ6 1142 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 TTC22Q5TAA0 569 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.03■□□□□ 0.64
MBD1-207ENST00000398488 ARMC9Q7Z3E5 817 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 STRBPQ96SI9 672 aaKnown RBP19.03■□□□□ 0.64
MBD1-207ENST00000398488 OTOFQ9HC10 1997 aa19.03■□□□□ 0.64
MBD1-207ENST00000398488 PPP1R12BO60237 982 aaPredicted RBP19.02■□□□□ 0.64
MBD1-207ENST00000398488 AOC2O75106 756 aa19.02■□□□□ 0.64
MBD1-207ENST00000398488 USP5P45974 858 aa19.02■□□□□ 0.64
MBD1-207ENST00000398488 RGMBQ6NW40 437 aa19.02■□□□□ 0.64
MBD1-207ENST00000398488 PAXIP1Q6ZW49 1069 aaPredicted RBP19.02■□□□□ 0.64
MBD1-207ENST00000398488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.02■□□□□ 0.64
MBD1-207ENST00000398488 CAPNS2Q96L46 248 aa19.02■□□□□ 0.64
MBD1-207ENST00000398488 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.64
MBD1-207ENST00000398488 ZFYP08048 801 aaPredicted RBP19.01■□□□□ 0.63
MBD1-207ENST00000398488 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
MBD1-207ENST00000398488 RRP1BQ14684 758 aaKnown RBP19.01■□□□□ 0.63
MBD1-207ENST00000398488 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
MBD1-207ENST00000398488 HHIPL1Q96JK4 782 aa19.01■□□□□ 0.63
MBD1-207ENST00000398488 FAM227BQ96M60 508 aa19.01■□□□□ 0.63
MBD1-207ENST00000398488 COL2A1P02458 1487 aaPredicted RBP19.01■□□□□ 0.63
MBD1-207ENST00000398488 PHF20L1A8MW92 1017 aa19■□□□□ 0.63
MBD1-207ENST00000398488 CYP2D6P10635 497 aa19■□□□□ 0.63
MBD1-207ENST00000398488 INPP5BP32019 993 aa19■□□□□ 0.63
MBD1-207ENST00000398488 ZNF157P51786 506 aaPredicted RBP19■□□□□ 0.63
MBD1-207ENST00000398488 ERICH6BQ5W0A0 696 aa19■□□□□ 0.63
MBD1-207ENST00000398488 RASAL3Q86YV0 1011 aa19■□□□□ 0.63
MBD1-207ENST00000398488 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
MBD1-207ENST00000398488 ZKSCAN4Q969J2 545 aaPredicted RBP19■□□□□ 0.63
MBD1-207ENST00000398488 AIDAQ96BJ3 306 aa19■□□□□ 0.63
MBD1-207ENST00000398488 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
MBD1-207ENST00000398488 DNAJC18Q9H819 358 aa19■□□□□ 0.63
MBD1-207ENST00000398488 DCP1AQ9NPI6 582 aaPredicted RBP19■□□□□ 0.63
MBD1-207ENST00000398488 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
MBD1-207ENST00000398488 DDX60LQ5H9U9 1706 aaKnown RBP19■□□□□ 0.63
MBD1-207ENST00000398488 A0A0D9SFI3 127 aa19■□□□□ 0.63
MBD1-207ENST00000398488 GPAA1O43292 621 aa19■□□□□ 0.63
MBD1-207ENST00000398488 SDSP20132 328 aa19■□□□□ 0.63
MBD1-207ENST00000398488 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
MBD1-207ENST00000398488 MYH1P12882 1939 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 FOXP2O15409 715 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 GJA5P36382 358 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 IREB2P48200 963 aaKnown RBP18.99■□□□□ 0.63
MBD1-207ENST00000398488 PLCD1P51178 756 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 MAP3K9P80192 1104 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 NMIQ13287 307 aaPredicted RBP18.99■□□□□ 0.63
MBD1-207ENST00000398488 VGLL4Q14135 290 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 CERS3Q8IU89 383 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 WRNIP1Q96S55 665 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 ZNF341Q9BYN7 854 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 SLC4A4Q9Y6R1 1079 aa18.99■□□□□ 0.63
MBD1-207ENST00000398488 PCNTO95613 3336 aa18.98■□□□□ 0.63
MBD1-207ENST00000398488 CYP2D7A0A087X1C5 515 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms