RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 ECE2O60344 883 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 PLCG2P16885 1265 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 SYT1P21579 422 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 USP5P45974 858 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 IGDCC4Q8TDY8 1250 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 LLPHQ9BRT6 129 aaKnown RBP20.59■□□□□ 0.89
MBD4-202ENST00000393278 BRPF3Q9ULD4 1205 aa20.59■□□□□ 0.89
MBD4-202ENST00000393278 KLF18A0A0U1RQI7 1052 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 BAG4O95429 457 aaKnown RBP20.58■□□□□ 0.89
MBD4-202ENST00000393278 FGRP09769 529 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 FKBP1AP62942 108 aaKnown RBP20.58■□□□□ 0.89
MBD4-202ENST00000393278 AOC3Q16853 763 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.89
MBD4-202ENST00000393278 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 CHMP4CQ96CF2 233 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 MTA3Q9BTC8 594 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 TOMM22Q9NS69 142 aa20.58■□□□□ 0.89
MBD4-202ENST00000393278 DDX11L8A8MPP1 907 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 STX6O43752 255 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 DTNBO60941 627 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 STK11IPQ8N1F8 1099 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 NAP1L2Q9ULW6 460 aaPredicted RBP20.58■□□□□ 0.88
MBD4-202ENST00000393278 DAGLAQ9Y4D2 1042 aa20.58■□□□□ 0.88
MBD4-202ENST00000393278 LIFRP42702 1097 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 RHBDL3P58872 404 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 SGMS1Q86VZ5 419 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 SMARCC2Q8TAQ2 1214 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 ESR2Q92731 530 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 PSMD1Q99460 953 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 LY9Q9HBG7 655 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 MCM9Q9NXL9 1143 aa20.57■□□□□ 0.88
MBD4-202ENST00000393278 TTF2Q9UNY4 1162 aaKnown RBP20.57■□□□□ 0.88
MBD4-202ENST00000393278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
MBD4-202ENST00000393278 GOLGA8BA8MQT2 603 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 JAK2O60674 1132 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
MBD4-202ENST00000393278 CCT2P78371 535 aaKnown RBP20.56■□□□□ 0.88
MBD4-202ENST00000393278 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
MBD4-202ENST00000393278 TGFBRAP1Q8WUH2 860 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 HPS5Q9UPZ3 1129 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 SCN9AQ15858 1988 aa20.56■□□□□ 0.88
MBD4-202ENST00000393278 NAV1Q8NEY1 1877 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 ZNF646O15015 1829 aaPredicted RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 F8W031 263 aaPredicted RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 IFIT3O14879 490 aaKnown RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 PPIP5K2O43314 1243 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 CTDNEP1O95476 244 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 USP17L8P0C7I0 530 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 CYP2D6P10635 497 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 PDCP20941 246 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 DACT2Q5SW24 774 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 FOXD4L5Q5VV16 416 aaPredicted RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 TEX11Q8IYF3 940 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 FOXD4L4Q8WXT5 416 aaPredicted RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
MBD4-202ENST00000393278 NCOA5Q9HCD5 579 aaKnown RBP20.55■□□□□ 0.88
MBD4-202ENST00000393278 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 ORC4O43929 436 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
MBD4-202ENST00000393278 EVX2Q03828 476 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
MBD4-202ENST00000393278 C12orf60Q5U649 245 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 CDK5RAP2Q96SN8 1893 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 ROBO3Q96MS0 1386 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
MBD4-202ENST00000393278 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
MBD4-202ENST00000393278 APOA5Q6Q788 366 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 HHIPL2Q6UWX4 724 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 SENP2Q9HC62 589 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 MTMR6Q9Y217 621 aa20.54■□□□□ 0.88
MBD4-202ENST00000393278 DDX60LQ5H9U9 1706 aaKnown RBP20.53■□□□□ 0.88
MBD4-202ENST00000393278 PTPDC1A2A3K4 754 aa20.53■□□□□ 0.88
MBD4-202ENST00000393278 MAPKAPK5Q8IW41 473 aa20.53■□□□□ 0.88
MBD4-202ENST00000393278 AMOTL1Q8IY63 956 aa20.53■□□□□ 0.88
MBD4-202ENST00000393278 ERICH2A1L162 156 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 DHX16O60231 1041 aaKnown RBP20.52■□□□□ 0.88
MBD4-202ENST00000393278 PDE4BQ07343 736 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 WTAPQ15007 396 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 TEKT1Q969V4 418 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
MBD4-202ENST00000393278 FLT1P17948 1338 aa20.52■□□□□ 0.87
MBD4-202ENST00000393278 PRDM1O75626 825 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 PTMSP20962 102 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 NT5C2P49902 561 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 SCNN1DP51172 638 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 TMTC2Q8N394 836 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 DDX11Q96FC9 970 aa20.51■□□□□ 0.87
MBD4-202ENST00000393278 ZKSCAN3Q9BRR0 538 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms