RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NRDCO43847 1150 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 NCAPGQ9BPX3 1015 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 AFMP43652 599 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 NR5A1Q13285 461 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 APPBP2Q92624 585 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 CARD6Q9BX69 1037 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 ADAM21Q9UKJ8 722 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 NEMFO60524 1076 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 TOP1P11387 765 aaKnown RBP14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 MB21D2Q8IYB1 491 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 GOLGA6L1Q8N7Z2 621 aa14.28□□□□□ -0.12
PRPF40B-202ENST00000380281 PDE4BQ07343 736 aa14.27□□□□□ -0.12
PRPF40B-202ENST00000380281 TTC31Q49AM3 519 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-202ENST00000380281 AXDND1Q5T1B0 1012 aaPredicted RBP14.27□□□□□ -0.12
PRPF40B-202ENST00000380281 USP49Q70CQ1 688 aa14.27□□□□□ -0.12
PRPF40B-202ENST00000380281 ABCF2Q9UG63 623 aa14.27□□□□□ -0.12
PRPF40B-202ENST00000380281 ZBTB43O43298 467 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 CAVIN2O95810 425 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 CDC25BP30305 580 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 NLRP12P59046 1061 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 CT47A1Q5JQC4 288 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 MAGEB6Q8N7X4 407 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 GOLGA5Q8TBA6 731 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 IRX2Q9BZI1 471 aaPredicted RBP14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 ADGRL3Q9HAR2 1447 aa14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
PRPF40B-202ENST00000380281 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 FOXP4Q8IVH2 680 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 SALL1Q9NSC2 1324 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 PRDM1O75626 825 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 AK7Q96M32 723 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 NAPBQ9H115 298 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 TMOD3Q9NYL9 352 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 SLIT1O75093 1534 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 NEDD4P46934 1319 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 MBD4O95243 580 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 GSDMDP57764 484 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 GNG11P61952 73 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 NCAPHQ15003 741 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 APOA5Q6Q788 366 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 AKAP2Q9Y2D5 859 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 SLC12A7Q9Y666 1083 aa14.26□□□□□ -0.13
PRPF40B-202ENST00000380281 TDO2P48775 406 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 TCIRG1Q13488 830 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 PLEKHA4Q9H4M7 779 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 KCNG1Q9UIX4 513 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
PRPF40B-202ENST00000380281 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 EVCP57679 992 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 LZTFL1Q9NQ48 299 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 POLR3EQ9NVU0 708 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 ZSWIM5Q9P217 1185 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 JAG2Q9Y219 1238 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 H3BQF6 201 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 PES1O00541 588 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 TFRCP02786 760 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 MTF1Q14872 753 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 SLC39A14Q15043 492 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 AGXT2Q9BYV1 514 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 SERTAD1Q9UHV2 236 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 JCADQ9P266 1359 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 YEATS4O95619 227 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 CMA1P23946 247 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 ACTN2P35609 894 aa14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 CC2D1AQ6P1N0 951 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-202ENST00000380281 SRCAPQ6ZRS2 3230 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 MYL5Q02045 173 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 DIS3L2Q8IYB7 885 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 DHX58Q96C10 678 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 UBXN6Q9BZV1 441 aa14.23□□□□□ -0.13
PRPF40B-202ENST00000380281 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms