RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 PRDM1O75626 825 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 MYCT1Q8N699 235 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 EYA3Q99504 573 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 SUDS3Q9H7L9 328 aaPredicted RBP18.26■□□□□ 0.51
RGP1-201ENST00000378078 SPTLC2O15270 562 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 SCYL2Q6P3W7 929 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 CEP120Q8N960 986 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
RGP1-201ENST00000378078 TXNDC9O14530 226 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 OATP04181 439 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
RGP1-201ENST00000378078 CAPN12Q6ZSI9 719 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 HFM1A2PYH4 1435 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 BICDL2A1A5D9 508 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 CFBP00751 764 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 INTS8Q75QN2 995 aaKnown RBP18.25■□□□□ 0.51
RGP1-201ENST00000378078 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 MYL10Q9BUA6 226 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 FEZ2Q9UHY8 353 aaPredicted RBP18.25■□□□□ 0.51
RGP1-201ENST00000378078 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 OPA1O60313 960 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 NSMCE1Q8WV22 266 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 PARD3BQ8TEW8 1205 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 STMN2Q93045 179 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
RGP1-201ENST00000378078 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 IL2RBP14784 551 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 IL1RL1Q01638 556 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
RGP1-201ENST00000378078 ST7Q9NRC1 585 aa18.25■□□□□ 0.51
RGP1-201ENST00000378078 CAPN2P17655 700 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 AZI2Q9H6S1 392 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 ASIC2Q16515 512 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 ARHGAP44Q17R89 818 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 NXNQ6DKJ4 435 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
RGP1-201ENST00000378078 DAPK1P53355 1430 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 ARHGEF35A5YM69 484 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 NEMFO60524 1076 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
RGP1-201ENST00000378078 ARHGEF2Q92974 986 aaKnown RBP18.24■□□□□ 0.51
RGP1-201ENST00000378078 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
RGP1-201ENST00000378078 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
RGP1-201ENST00000378078 CLUL1Q15846 466 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 ZNF710Q8N1W2 664 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 KRT86O43790 486 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 CD19P15391 556 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 ABCC5O15440 1437 aa18.24■□□□□ 0.51
RGP1-201ENST00000378078 STK10O94804 968 aaKnown RBP18.23■□□□□ 0.51
RGP1-201ENST00000378078 APBA3O96018 575 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 CASP2P42575 452 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 MMS19Q96T76 1030 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.23■□□□□ 0.51
RGP1-201ENST00000378078 H0YIN7 160 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.23■□□□□ 0.51
RGP1-201ENST00000378078 NOS1P29475 1434 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 CALCOCO2Q13137 446 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 FAM114A2Q9NRY5 505 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 TCP10L2B9ZVM9 353 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 FAM102BQ5T8I3 360 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 SAMD15Q9P1V8 674 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 MTRF1LQ9UGC7 380 aaKnown RBP18.23■□□□□ 0.51
RGP1-201ENST00000378078 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 KRT83P78385 493 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 CARD10Q9BWT7 1032 aa18.23■□□□□ 0.51
RGP1-201ENST00000378078 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
RGP1-201ENST00000378078 TMTC4Q5T4D3 741 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 DPP8Q6V1X1 898 aaPredicted RBP18.22■□□□□ 0.51
RGP1-201ENST00000378078 TRPC6Q9Y210 931 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 SETDB1Q15047 1291 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 ALDH3A1P30838 453 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 RYBPQ8N488 228 aaPredicted RBP18.22■□□□□ 0.51
RGP1-201ENST00000378078 FAM184BQ9ULE4 1060 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 GNA11P29992 359 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 DCUN1D2Q6PH85 259 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
RGP1-201ENST00000378078 MRPL44Q9H9J2 332 aaKnown RBP18.22■□□□□ 0.51
RGP1-201ENST00000378078 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 KLHDC4Q8TBB5 520 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
RGP1-201ENST00000378078 CALUO43852 315 aaPredicted RBP18.21■□□□□ 0.51
RGP1-201ENST00000378078 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 C8orf58Q8NAV2 365 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 TTC14Q96N46 770 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 FNDC3AQ9Y2H6 1198 aaKnown RBP18.21■□□□□ 0.51
RGP1-201ENST00000378078 IDI1Q13907 227 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 TPH2Q8IWU9 490 aa18.21■□□□□ 0.51
RGP1-201ENST00000378078 CMTR1Q8N1G2 835 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms