RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 CDCA7Q9BWT1 371 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
TNFRSF9-201ENST00000377507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 CUTAO60888 179 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 CAMTA2O94983 1202 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 WASF1Q92558 559 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 SYTL4Q96C24 671 aaPredicted RBP13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 SEC31BQ9NQW1 1179 aa13.58□□□□□ -0.23
TNFRSF9-201ENST00000377507 BCL9LQ86UU0 1499 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 COL22A1Q8NFW1 1626 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 BCORQ6W2J9 1755 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 KCNJ6P48051 423 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 SSRP1Q08945 709 aaKnown RBP13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 TRIM29Q14134 588 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 CCDC152Q4G0S7 254 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 FILIP1Q7Z7B0 1213 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 NACAP1Q9BZK3 213 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.24
TNFRSF9-201ENST00000377507 SNAP23O00161 211 aa13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 TMTC2Q8N394 836 aa13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 LCORLQ8N3X6 602 aa13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
TNFRSF9-201ENST00000377507 USP27XA6NNY8 438 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 PRKAB2O43741 272 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 NTSR2O95665 410 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 MMP1P03956 469 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 BCAMP50895 628 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 TPM4P67936 248 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 FBXW7Q969H0 707 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 MYL10Q9BUA6 226 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 IFNKQ9P0W0 207 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 BIN1O00499 593 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 MYO1BO43795 1136 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 CCDC150Q8NCX0 1101 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 SLC26A6Q9BXS9 759 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 SLC4A4Q9Y6R1 1079 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 ZNF804BA4D1E1 1349 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 CHD4Q14839 1912 aa13.56□□□□□ -0.24
TNFRSF9-201ENST00000377507 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 TOB1P50616 345 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 MDM2Q00987 491 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 GNL2Q13823 731 aaKnown RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 PTPN14Q15678 1187 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 CLIC6Q96NY7 704 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 LAMB2P55268 1798 aa13.55□□□□□ -0.24
TNFRSF9-201ENST00000377507 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 CCDC196A0A1B0GTZ2 297 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 TDO2P48775 406 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 SIK1P57059 783 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 CHRNDQ07001 517 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 NCBP1Q09161 790 aaKnown RBP13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 WTAPQ15007 396 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 RTN1Q16799 776 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 STK11IPQ8N1F8 1099 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 CCDC112Q8NEF3 446 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 KIF2AO00139 706 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 DEXIO95424 95 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 PTPREP23469 700 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 FANCCQ00597 558 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 ITPK1Q13572 414 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 RILPL1Q5EBL4 403 aa13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms