RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 EYA2O00167 538 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 CIAO1O76071 339 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 BCAMP50895 628 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 PPIL2Q13356 520 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 OTUD7AQ8TE49 926 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
HLA-DQA1-202ENST00000374949 PDE8BO95263 885 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 CTGFP29279 349 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 INPP5BP32019 993 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 PDE1AP54750 535 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 KIF22Q14807 665 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 FAM83AQ86UY5 434 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 MAST3O60307 1309 aa13.3□□□□□ -0.28
HLA-DQA1-202ENST00000374949 H0YGN5 161 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 IFIT2P09913 472 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 MX1P20591 662 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 TFCP2Q12800 502 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 BMP2KLQ5H9B9 411 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 ATG9AQ7Z3C6 839 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 ZCCHC17Q9NP64 241 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
HLA-DQA1-202ENST00000374949 MGAMO43451 1857 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 PUM3Q15397 648 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 FKBP1CQ5VVH2 108 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 AACSQ86V21 672 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 HOOK2Q96ED9 719 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 ADGRA2Q96PE1 1338 aa13.28□□□□□ -0.28
HLA-DQA1-202ENST00000374949 PDHXO00330 501 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 IFIT1P09914 478 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FGFR2P21802 821 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PPATQ06203 517 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TCP10Q12799 353 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 MTFR1Q15390 333 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 DIXDC1Q155Q3 683 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 HHIPL2Q6UWX4 724 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 C17orf99Q6UX52 265 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TRIM47Q96LD4 638 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GNRH1P01148 92 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 OSBPP22059 807 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PSMC4P43686 418 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PRMT2P55345 433 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 NFIAQ12857 509 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TNNI3KQ59H18 835 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TTC41PQ6P2S7 1318 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ANKRD23Q86SG2 305 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FAM151AQ8WW52 585 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 AKAP2Q9Y2D5 859 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FPGT-TNNI3KV9GXZ4 949 aa13.26□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PTPRFP10586 1907 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ERC2O15083 957 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 SLC5A1P13866 664 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PRDX5P30044 214 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 MOGSQ13724 837 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CDC42EP5Q6NZY7 148 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 KCNH4Q9UQ05 1017 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
HLA-DQA1-202ENST00000374949 MYH2Q9UKX2 1941 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GSPT1P15170 499 aaKnown RBP13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GRK4P32298 578 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 PRKCZQ05513 592 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 NEUROD6Q96NK8 337 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ZNF112Q9UJU3 913 aa13.24□□□□□ -0.29
HLA-DQA1-202ENST00000374949 ATRNL1Q5VV63 1379 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CYP2C8P10632 490 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 CCL5P13501 91 aa13.23□□□□□ -0.29
HLA-DQA1-202ENST00000374949 SDSP20132 328 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms