RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MTRF1LQ9UGC7 380 aaKnown RBP20.33■□□□□ 0.84
SNX27-202ENST00000368841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.33■□□□□ 0.84
SNX27-202ENST00000368841 BSPRYQ5W0U4 402 aa20.32■□□□□ 0.84
SNX27-202ENST00000368841 DHX32Q7L7V1 743 aaKnown RBP20.32■□□□□ 0.84
SNX27-202ENST00000368841 C10orf67Q8IYJ2 551 aa20.32■□□□□ 0.84
SNX27-202ENST00000368841 NOL3O60936 208 aaKnown RBP20.32■□□□□ 0.84
SNX27-202ENST00000368841 CALCOCO2Q13137 446 aa20.32■□□□□ 0.84
SNX27-202ENST00000368841 A0A1B0GUL7 405 aa20.32■□□□□ 0.84
SNX27-202ENST00000368841 CASC4Q6P4E1 433 aa20.32■□□□□ 0.84
SNX27-202ENST00000368841 GPHNQ9NQX3 736 aaPredicted RBP20.32■□□□□ 0.84
SNX27-202ENST00000368841 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
SNX27-202ENST00000368841 FAM47AQ5JRC9 791 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 KLHL7Q8IXQ5 586 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 FAM227BQ96M60 508 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 MAP3K5Q99683 1374 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 TSGA10Q9BZW7 698 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 NSD2O96028 1365 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 ANKRD2Q9GZV1 360 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 MTUS1Q9ULD2 1270 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 B4DLN1 442 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 TOM1O60784 492 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 MRPL12P52815 198 aaKnown RBP20.31■□□□□ 0.84
SNX27-202ENST00000368841 INTS8Q75QN2 995 aaKnown RBP20.31■□□□□ 0.84
SNX27-202ENST00000368841 NBPF11Q86T75 865 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 VPS52Q8N1B4 723 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 IGSF22Q8N9C0 903 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 KIFAP3Q92845 792 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 PHACTR3Q96KR7 559 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 TTC14Q96N46 770 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 PLCH2O75038 1416 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
SNX27-202ENST00000368841 PLCG2P16885 1265 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 ASXL1Q8IXJ9 1541 aa20.31■□□□□ 0.84
SNX27-202ENST00000368841 MGARPQ8TDB4 240 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 GCNT3O95395 438 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 KCNJ14Q9UNX9 436 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 ZNF131P52739 623 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
SNX27-202ENST00000368841 ABL1P00519 1130 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 C8orf34Q49A92 452 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 MYCT1Q8N699 235 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 GMNNO75496 209 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 CHMLP26374 656 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 MAN1A1P33908 653 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 SATB1Q01826 763 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 EYA3Q99504 573 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 IQUBQ8NA54 791 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 XAGE2Q96GT9 111 aa20.3■□□□□ 0.84
SNX27-202ENST00000368841 GTPBP4Q9BZE4 634 aaKnown RBP20.3■□□□□ 0.84
SNX27-202ENST00000368841 TNNC1P63316 161 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 KRBA2Q6ZNG9 492 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 MAPKAPK5Q8IW41 473 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 TAB3Q8N5C8 712 aaPredicted RBP20.29■□□□□ 0.84
SNX27-202ENST00000368841 FAM76AQ8TAV0 307 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 SLC27A2O14975 620 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 HIBADHP31937 336 aaKnown RBP20.29■□□□□ 0.84
SNX27-202ENST00000368841 ITIH3Q06033 890 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 TRAF1Q13077 416 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 CALUO43852 315 aaPredicted RBP20.29■□□□□ 0.84
SNX27-202ENST00000368841 SETDB1Q15047 1291 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 GKAP1Q5VSY0 366 aaPredicted RBP20.29■□□□□ 0.84
SNX27-202ENST00000368841 RNF169Q8NCN4 708 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
SNX27-202ENST00000368841 TBC1D8BQ0IIM8 1120 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 IL16Q14005 1332 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 RFX1P22670 979 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 CCDC110Q8TBZ0 833 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 JAKMIP2Q96AA8 810 aa20.29■□□□□ 0.84
SNX27-202ENST00000368841 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 ELP1O95163 1332 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 SYNRGQ9UMZ2 1314 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 RPS6KB1P23443 525 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 VAV2P52735 878 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 ARHGAP44Q17R89 818 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 NOP9Q86U38 636 aaKnown RBP20.28■□□□□ 0.84
SNX27-202ENST00000368841 IFT74Q96LB3 600 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 ARHGEF35A5YM69 484 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 IVLP07476 585 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 TAB2Q9NYJ8 693 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 DENND2AQ9ULE3 1009 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 CIB2O75838 187 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 SMTNP53814 917 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 DENND4BO75064 1496 aaPredicted RBP20.28■□□□□ 0.84
SNX27-202ENST00000368841 CFBP00751 764 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 BIRC2Q13490 618 aa20.28■□□□□ 0.84
SNX27-202ENST00000368841 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
SNX27-202ENST00000368841 EVCP57679 992 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 TTC31Q49AM3 519 aaPredicted RBP20.27■□□□□ 0.84
SNX27-202ENST00000368841 ARHGEF10LQ9HCE6 1279 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 ABCC1P33527 1531 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.27■□□□□ 0.84
SNX27-202ENST00000368841 UTP11Q9Y3A2 253 aaKnown RBP20.27■□□□□ 0.84
SNX27-202ENST00000368841 AFG3L2Q9Y4W6 797 aa20.27■□□□□ 0.84
SNX27-202ENST00000368841 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms