RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 IPO4Q8TEX9 1081 aaKnown RBP14.83□□□□□ -0.04
SCN8A-202ENST00000355133 DDX17Q92841 729 aaKnown RBP14.83□□□□□ -0.04
SCN8A-202ENST00000355133 SLC52A2Q9HAB3 445 aa14.83□□□□□ -0.04
SCN8A-202ENST00000355133 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
SCN8A-202ENST00000355133 AKR1B15C9JRZ8 316 aaPredicted RBP14.82□□□□□ -0.04
SCN8A-202ENST00000355133 CDCA7Q9BWT1 371 aaPredicted RBP14.82□□□□□ -0.04
SCN8A-202ENST00000355133 KCNK9Q9NPC2 374 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 SEL1L2Q5TEA6 688 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 ANO1Q5XXA6 986 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 IL13P35225 146 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 USH1GQ495M9 461 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 CNGA4Q8IV77 575 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 USP19O94966 1318 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
SCN8A-202ENST00000355133 TBC1D8BQ0IIM8 1120 aa14.82□□□□□ -0.04
SCN8A-202ENST00000355133 ANGEL1Q9UNK9 670 aaKnown RBP14.82□□□□□ -0.04
SCN8A-202ENST00000355133 BAG1Q99933 345 aaPredicted RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 ZHX1Q9UKY1 873 aaPredicted RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 SNX14Q9Y5W7 946 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 H0YIN7 160 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 TNFAIP3P21580 790 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 PSMC4P43686 418 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 CPXCR1Q8N123 301 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 MTUS1Q9ULD2 1270 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 KCNH3Q9ULD8 1083 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 DTNBO60941 627 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 MAPKAPK5Q8IW41 473 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 STX10O60499 249 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 ATP2A2P16615 1042 aaKnown RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 KIFAP3Q92845 792 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 IFT74Q96LB3 600 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 AGTPBP1Q9UPW5 1226 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 SBNO1A3KN83 1393 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 PIK3C2GO75747 1445 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 NOP56O00567 594 aaKnown RBP14.81□□□□□ -0.04
SCN8A-202ENST00000355133 TNNC1P63316 161 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 RASA3Q14644 834 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 HAUS3Q68CZ6 603 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 DNAJC10Q8IXB1 793 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 TSGA10Q9BZW7 698 aa14.81□□□□□ -0.04
SCN8A-202ENST00000355133 ARHGEF35A5YM69 484 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 ATL3Q6DD88 541 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 RNF34Q969K3 372 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 MAST3O60307 1309 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 SLC1A4P43007 532 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 STRN3Q13033 797 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 CCDC117Q8IWD4 279 aaPredicted RBP14.8□□□□□ -0.04
SCN8A-202ENST00000355133 DIS3L2Q8IYB7 885 aaKnown RBP14.8□□□□□ -0.04
SCN8A-202ENST00000355133 DDX23Q9BUQ8 820 aaKnown RBP14.8□□□□□ -0.04
SCN8A-202ENST00000355133 POLR2DO15514 142 aaKnown RBP14.8□□□□□ -0.04
SCN8A-202ENST00000355133 SPOPO43791 374 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 TUBB4AP04350 444 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 TTC38Q5R3I4 469 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 FAM173BQ6P4H8 233 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 IGSF22Q8N9C0 903 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 SPATA5Q8NB90 893 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 LPIN2Q92539 896 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 TTC14Q96N46 770 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 TRPC3Q13507 836 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 PHKBQ93100 1093 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 SMC6Q96SB8 1091 aa14.8□□□□□ -0.04
SCN8A-202ENST00000355133 CALUO43852 315 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-202ENST00000355133 ZEB2O60315 1214 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 VAV2P52735 878 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 UAP1Q16222 522 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-202ENST00000355133 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 GPIHBP1Q8IV16 184 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 UBLCP1Q8WVY7 318 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-202ENST00000355133 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
SCN8A-202ENST00000355133 TBC1D7Q9P0N9 293 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 ADCY7P51828 1080 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 TGFBRAP1Q8WUH2 860 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 ERCC3P19447 782 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 ZAP70P43403 619 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 RNASE9P60153 205 aaKnown RBP14.79□□□□□ -0.04
SCN8A-202ENST00000355133 CFAP58Q5T655 872 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 ANKS4BQ8N8V4 417 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 KIFC2Q96AC6 838 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 VPS18Q9P253 973 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 IVNS1ABPQ9Y6Y0 642 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 hCG_1642624A0A1W2PR95 340 aa14.79□□□□□ -0.04
SCN8A-202ENST00000355133 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 ABCC10Q5T3U5 1492 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 PNMA6EA0A0J9YXQ4 647 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 MNAT1P51948 309 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 CSGALNACT2Q8N6G5 542 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 KIAA1524Q8TCG1 905 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 RAD51AP2Q09MP3 1159 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 CCDC14Q49A88 953 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 NSMFQ6X4W1 530 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 DYMQ7RTS9 669 aa14.78□□□□□ -0.04
SCN8A-202ENST00000355133 SNX29Q8TEQ0 813 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms