RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ZFPM1Q8IX07 1006 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 SLC10A4Q96EP9 437 aa24.21■■□□□ 1.47
CLTA-202ENST00000345519 TCP10Q12799 353 aa24.2■■□□□ 1.46
CLTA-202ENST00000345519 RNF186Q9NXI6 227 aa24.2■■□□□ 1.46
CLTA-202ENST00000345519 TESPA1A2RU30 521 aaPredicted RBP24.19■■□□□ 1.46
CLTA-202ENST00000345519 IFIT2P09913 472 aaKnown RBP24.19■■□□□ 1.46
CLTA-202ENST00000345519 MAP3K9P80192 1104 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 SREBF2Q12772 1141 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 CRBNQ96SW2 442 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 ZNF341Q9BYN7 854 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 ANTXR1Q9H6X2 564 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 SNCAIPQ9Y6H5 919 aa24.19■■□□□ 1.46
CLTA-202ENST00000345519 MYH8P13535 1937 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 MANSC4A6NHS7 340 aaPredicted RBP24.18■■□□□ 1.46
CLTA-202ENST00000345519 SPDYE5A6NIY4 337 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 APBB1O00213 710 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 ATP5JP18859 108 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 INHBEP58166 350 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 WRNIP1Q96S55 665 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 LOC285556D6RIA3 1793 aa24.18■■□□□ 1.46
CLTA-202ENST00000345519 PLCG2P16885 1265 aa24.17■■□□□ 1.46
CLTA-202ENST00000345519 TTF1Q15361 905 aaPredicted RBP24.17■■□□□ 1.46
CLTA-202ENST00000345519 NOM1Q5C9Z4 860 aaKnown RBP24.17■■□□□ 1.46
CLTA-202ENST00000345519 NOL9Q5SY16 702 aaKnown RBP24.17■■□□□ 1.46
CLTA-202ENST00000345519 NDUFB9Q9Y6M9 179 aa24.17■■□□□ 1.46
CLTA-202ENST00000345519 HTTP42858 3142 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 DDTLA6NHG4 134 aaPredicted RBP24.16■■□□□ 1.46
CLTA-202ENST00000345519 CERS3Q8IU89 383 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 OPTNQ96CV9 577 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 MS4A4AQ96JQ5 239 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 OSBPL5Q9H0X9 879 aaPredicted RBP24.16■■□□□ 1.46
CLTA-202ENST00000345519 ELP3Q9H9T3 547 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 CSADQ9Y600 493 aa24.16■■□□□ 1.46
CLTA-202ENST00000345519 PHF20L1A8MW92 1017 aa24.15■■□□□ 1.46
CLTA-202ENST00000345519 TBC1D12O60347 775 aa24.15■■□□□ 1.46
CLTA-202ENST00000345519 BAG3O95817 575 aa24.15■■□□□ 1.46
CLTA-202ENST00000345519 AATFQ9NY61 560 aaKnown RBP eCLIP24.15■■□□□ 1.46
CLTA-202ENST00000345519 TSKSQ9UJT2 592 aa24.15■■□□□ 1.46
CLTA-202ENST00000345519 BAZ2AQ9UIF9 1905 aaKnown RBP24.15■■□□□ 1.46
CLTA-202ENST00000345519 MAP3K12Q12852 859 aa24.14■■□□□ 1.45
CLTA-202ENST00000345519 HDAC1Q13547 482 aaPredicted RBP24.14■■□□□ 1.45
CLTA-202ENST00000345519 MIGA2Q7L4E1 593 aa24.14■■□□□ 1.45
CLTA-202ENST00000345519 ERO1BQ86YB8 467 aa24.14■■□□□ 1.45
CLTA-202ENST00000345519 SH3RF3Q8TEJ3 882 aaPredicted RBP24.14■■□□□ 1.45
CLTA-202ENST00000345519 HAUS7Q99871 368 aa24.14■■□□□ 1.45
CLTA-202ENST00000345519 TRPA1O75762 1119 aa24.13■■□□□ 1.45
CLTA-202ENST00000345519 IDH1O75874 414 aaKnown RBP24.13■■□□□ 1.45
CLTA-202ENST00000345519 MKRN3Q13064 507 aaKnown RBP24.13■■□□□ 1.45
CLTA-202ENST00000345519 PICALMQ13492 652 aa24.13■■□□□ 1.45
CLTA-202ENST00000345519 TEX11Q8IYF3 940 aa24.13■■□□□ 1.45
CLTA-202ENST00000345519 ZKSCAN4Q969J2 545 aaPredicted RBP24.13■■□□□ 1.45
CLTA-202ENST00000345519 FLT1P17948 1338 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
CLTA-202ENST00000345519 ALDH1A1P00352 501 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 INPP5BP32019 993 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 PPIL2Q13356 520 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 METTL16Q86W50 562 aaKnown RBP24.12■■□□□ 1.45
CLTA-202ENST00000345519 IFNL1Q8IU54 200 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 MAGEB6Q8N7X4 407 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 CNKSR2Q8WXI2 1034 aa24.12■■□□□ 1.45
CLTA-202ENST00000345519 NOL10Q9BSC4 688 aaKnown RBP24.12■■□□□ 1.45
CLTA-202ENST00000345519 TCRBV5S4A2TA0A5A2 114 aa24.11■■□□□ 1.45
CLTA-202ENST00000345519 IGF2BP3O00425 579 aaKnown RBP eCLIP24.11■■□□□ 1.45
CLTA-202ENST00000345519 CYP7A1P22680 504 aa24.11■■□□□ 1.45
CLTA-202ENST00000345519 PPATQ06203 517 aa24.11■■□□□ 1.45
CLTA-202ENST00000345519 RIOK1Q9BRS2 568 aaKnown RBP24.11■■□□□ 1.45
CLTA-202ENST00000345519 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
CLTA-202ENST00000345519 PTPN18Q99952 460 aa24.1■■□□□ 1.45
CLTA-202ENST00000345519 DHX36Q9H2U1 1008 aaKnown RBP24.1■■□□□ 1.45
CLTA-202ENST00000345519 ECHDC1Q9NTX5 307 aa24.1■■□□□ 1.45
CLTA-202ENST00000345519 PAG1Q9NWQ8 432 aa24.1■■□□□ 1.45
CLTA-202ENST00000345519 GOLIM4O00461 696 aa24.09■■□□□ 1.45
CLTA-202ENST00000345519 PDE6AP16499 860 aa24.09■■□□□ 1.45
CLTA-202ENST00000345519 GTF2A2P52657 109 aa24.09■■□□□ 1.45
CLTA-202ENST00000345519 KCNH4Q9UQ05 1017 aa24.09■■□□□ 1.45
CLTA-202ENST00000345519 CENPFP49454 3210 aa24.08■■□□□ 1.45
CLTA-202ENST00000345519 OTUD5Q96G74 571 aa24.08■■□□□ 1.45
CLTA-202ENST00000345519 DNAJC2Q99543 621 aaKnown RBP24.08■■□□□ 1.45
CLTA-202ENST00000345519 BOLA2Q9H3K6 86 aa24.08■■□□□ 1.45
CLTA-202ENST00000345519 HERC5Q9UII4 1024 aaKnown RBP24.08■■□□□ 1.45
CLTA-202ENST00000345519 IRF6O14896 467 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 DYNLL1P63167 89 aaKnown RBP24.07■■□□□ 1.44
CLTA-202ENST00000345519 SLC9C2Q5TAH2 1124 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 IFFO2Q5TF58 517 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 ZSCAN29Q8IWY8 852 aaPredicted RBP24.07■■□□□ 1.44
CLTA-202ENST00000345519 SCYL3Q8IZE3 742 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 TNS4Q8IZW8 715 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 BRI3BPQ8WY22 251 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 GCC1Q96CN9 775 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 EDC3Q96F86 508 aaKnown RBP24.07■■□□□ 1.44
CLTA-202ENST00000345519 ZCCHC17Q9NP64 241 aaKnown RBP24.07■■□□□ 1.44
CLTA-202ENST00000345519 TTC41PQ6P2S7 1318 aa24.07■■□□□ 1.44
CLTA-202ENST00000345519 CTNND1O60716 968 aaKnown RBP24.06■■□□□ 1.44
CLTA-202ENST00000345519 TGFBRAP1Q8WUH2 860 aa24.06■■□□□ 1.44
CLTA-202ENST00000345519 PI4KBQ9UBF8 816 aa24.06■■□□□ 1.44
CLTA-202ENST00000345519 MGAMO43451 1857 aa24.06■■□□□ 1.44
CLTA-202ENST00000345519 SLURP2P0DP57 97 aa24.05■■□□□ 1.44
CLTA-202ENST00000345519 ADD2P35612 726 aa24.05■■□□□ 1.44
CLTA-202ENST00000345519 MIGA1Q8NAN2 632 aa24.05■■□□□ 1.44
CLTA-202ENST00000345519 ZNF532Q9HCE3 1301 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms