RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 USP40Q9NVE5 1235 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
RFC4-201ENST00000296273 A0A0G2JLL6 359 aaPredicted RBP13.11□□□□□ -0.31
RFC4-201ENST00000296273 ENTPD3O75355 529 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 CIAO1O76071 339 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 PRKCZQ05513 592 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 ATG9AQ7Z3C6 839 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 PRRT2Q7Z6L0 340 aaPredicted RBP13.11□□□□□ -0.31
RFC4-201ENST00000296273 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
RFC4-201ENST00000296273 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
RFC4-201ENST00000296273 CYP2C8P10632 490 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 ATP2B3Q16720 1220 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 U2AF1L4Q8WU68 220 aaKnown RBP13.1□□□□□ -0.31
RFC4-201ENST00000296273 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 ATRNL1Q5VV63 1379 aa13.1□□□□□ -0.31
RFC4-201ENST00000296273 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 SGPL1O95470 568 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 PTPRAP18433 802 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 IRF5Q13568 498 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
RFC4-201ENST00000296273 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
RFC4-201ENST00000296273 A0A1W2PPC1 479 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 ADCY3O60266 1144 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.31
RFC4-201ENST00000296273 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.31
RFC4-201ENST00000296273 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.31
RFC4-201ENST00000296273 RGS3P49796 1198 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.31
RFC4-201ENST00000296273 SMCR8Q8TEV9 937 aaPredicted RBP13.08□□□□□ -0.31
RFC4-201ENST00000296273 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 PRO3102Q9H379 93 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 GABRQQ9UN88 632 aa13.08□□□□□ -0.31
RFC4-201ENST00000296273 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
RFC4-201ENST00000296273 GAKO14976 1311 aa13.08□□□□□ -0.32
RFC4-201ENST00000296273 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 FLT3LGP49771 235 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 ZFPM1Q8IX07 1006 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 SIL1Q9H173 461 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 DOCK2Q92608 1830 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 ZBTB7BO15156 539 aaPredicted RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 PHKA1P46020 1223 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 SPTY2D1Q68D10 685 aaPredicted RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 DZIP1Q86YF9 867 aaKnown RBP13.07□□□□□ -0.32
RFC4-201ENST00000296273 COA7Q96BR5 231 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
RFC4-201ENST00000296273 MGAMO43451 1857 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 EVI5O60447 810 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 INHAP05111 366 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
RFC4-201ENST00000296273 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
RFC4-201ENST00000296273 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
RFC4-201ENST00000296273 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
RFC4-201ENST00000296273 TBC1D12O60347 775 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
RFC4-201ENST00000296273 TFRCP02786 760 aaKnown RBP13.05□□□□□ -0.32
RFC4-201ENST00000296273 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
RFC4-201ENST00000296273 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 DEFB118Q96PH6 123 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 COPRSQ9NQ92 184 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 PAK6Q9NQU5 681 aaPredicted RBP13.05□□□□□ -0.32
RFC4-201ENST00000296273 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
RFC4-201ENST00000296273 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 ELNP15502 786 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 BTDP43251 543 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.321e-8■■■■■ 40.1
RFC4-201ENST00000296273 PICALMQ13492 652 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 AAMPQ13685 434 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 CRISPLD2Q9H0B8 497 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 OSBPL5Q9H0X9 879 aaPredicted RBP13.04□□□□□ -0.32
RFC4-201ENST00000296273 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 MROH7-TTC4A0A0A0MT08 1334 aa13.04□□□□□ -0.32
RFC4-201ENST00000296273 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
RFC4-201ENST00000296273 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
RFC4-201ENST00000296273 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms